RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MYOD1P15172 320 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 HLA-GP17693 338 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 SCAND1P57086 179 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 MXD1Q05195 221 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 FAM106AQ4KMX7 169 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 OR4A47Q6IF82 309 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 IL17DQ8TAD2 202 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 EEF1AKMT3Q96AZ1 226 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 SLC25A38Q96DW6 304 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 AIFM2Q9BRQ8 373 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 ETV7Q9Y603 341 aa13.88□□□□□ -0.19
CLN6-220ENST00000637450 RBFOX2O43251 390 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLN6-220ENST00000637450 PPYP01298 95 aa13.87□□□□□ -0.19
CLN6-220ENST00000637450 TIMM50Q3ZCQ8 353 aa13.87□□□□□ -0.19
CLN6-220ENST00000637450 ZNF773Q6PK81 442 aa13.87□□□□□ -0.19
CLN6-220ENST00000637450 SPAG16Q8N0X2 631 aa13.87□□□□□ -0.19
CLN6-220ENST00000637450 OR13F1Q8NGS4 319 aa13.87□□□□□ -0.19
CLN6-220ENST00000637450 CACNG8Q8WXS5 425 aa13.87□□□□□ -0.19
CLN6-220ENST00000637450 RNF167Q9H6Y7 350 aa13.87□□□□□ -0.19
CLN6-220ENST00000637450 IGLV11-55A0A075B6I3 123 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 A0A0A6YYH2 397 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 TRBV7-1A0A0A6YYK4 115 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 ZNF320A2RRD8 509 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 TMEM213A2RRL7 107 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 A6NJ64 397 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 A8MWP6 167 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 REG1AP05451 166 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 CLEC3BP05452 202 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 DEFA4P12838 97 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 OR2B8PP59922 312 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 IDNKQ5T6J7 187 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 ZNF57Q68EA5 555 aaPredicted RBP13.86□□□□□ -0.19
CLN6-220ENST00000637450 TMEM61Q8N0U2 210 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 HRASLSQ9HDD0 168 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 MLXQ9UH92 298 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 SELENOKQ9Y6D0 94 aa13.86□□□□□ -0.19
CLN6-220ENST00000637450 SULT1C2O00338 296 aa13.85□□□□□ -0.19
CLN6-220ENST00000637450 HPRT1P00492 218 aa13.85□□□□□ -0.19
CLN6-220ENST00000637450 TAS2R31P59538 309 aa13.85□□□□□ -0.19
CLN6-220ENST00000637450 POU2AF1Q16633 256 aa13.85□□□□□ -0.19
CLN6-220ENST00000637450 SLC16A13Q7RTY0 426 aa13.85□□□□□ -0.19
CLN6-220ENST00000637450 UXS1Q8NBZ7 420 aa13.85□□□□□ -0.19
CLN6-220ENST00000637450 GIMAP1Q8WWP7 306 aa13.85□□□□□ -0.19
CLN6-220ENST00000637450 CXorf58Q96LI9 332 aa13.85□□□□□ -0.19
CLN6-220ENST00000637450 SLC5A7Q9GZV3 580 aa13.85□□□□□ -0.19
CLN6-220ENST00000637450 AUNIPQ9H7T9 357 aa13.85□□□□□ -0.19
CLN6-220ENST00000637450 TRAV3A0A0B4J244 114 aa13.84□□□□□ -0.19
CLN6-220ENST00000637450 MFSD2BA6NFX1 497 aa13.84□□□□□ -0.19
CLN6-220ENST00000637450 UPK2O00526 184 aa13.84□□□□□ -0.19
CLN6-220ENST00000637450 NQO2P16083 231 aa13.84□□□□□ -0.19
CLN6-220ENST00000637450 Q9H521 79 aa13.84□□□□□ -0.19
CLN6-220ENST00000637450 DIABLOQ9NR28 239 aa13.84□□□□□ -0.19
CLN6-220ENST00000637450 LOC100506127A0A0U1RQW1 187 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 IGLC7A0M8Q6 106 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 ATP6V1G2O95670 118 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 FCER2P06734 321 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 FGF2P09038 288 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 C8orf88P0DMB2 117 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 CBX5P45973 191 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 FXYD4P59646 89 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 CATR1Q13166 79 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 TM4SF20Q53R12 229 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 UNQ9165/PRO28630Q6UXU0 137 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 ZNF818PQ6ZRF7 136 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 OR5AP2Q8NGF4 316 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 ZNF502Q8TBZ5 544 aa13.83□□□□□ -0.2
CLN6-220ENST00000637450 SRSF8Q9BRL6 282 aaKnown RBP13.83□□□□□ -0.2
CLN6-220ENST00000637450 PTBP1P26599 531 aaKnown RBP eCLIP13.82□□□□□ -0.2
CLN6-220ENST00000637450 OR52B4Q8NGK2 314 aa13.82□□□□□ -0.2
CLN6-220ENST00000637450 CD300LFQ8TDQ1 290 aa13.82□□□□□ -0.2
CLN6-220ENST00000637450 COMMD5Q9GZQ3 224 aa13.82□□□□□ -0.2
CLN6-220ENST00000637450 PLEKHA2Q9HB19 425 aa13.82□□□□□ -0.2
CLN6-220ENST00000637450 ALMS1Q8TCU4 4167 aa13.82□□□□□ -0.2
CLN6-220ENST00000637450 TRAV25A0A0B4J276 109 aa13.81□□□□□ -0.2
CLN6-220ENST00000637450 TMEM127O75204 238 aa13.81□□□□□ -0.2
CLN6-220ENST00000637450 JTBO76095 146 aa13.81□□□□□ -0.2
CLN6-220ENST00000637450 SCAF4O95104 1147 aaKnown RBP13.81□□□□□ -0.2
CLN6-220ENST00000637450 GNRHRP30968 328 aa13.81□□□□□ -0.2
CLN6-220ENST00000637450 ANKRD55Q3KP44 614 aa13.81□□□□□ -0.2
CLN6-220ENST00000637450 BTNL8Q6UX41 500 aa13.81□□□□□ -0.2
CLN6-220ENST00000637450 OR51H1Q8NH63 302 aa13.81□□□□□ -0.2
CLN6-220ENST00000637450 MARC2Q969Z3 335 aa13.81□□□□□ -0.2
CLN6-220ENST00000637450 TMEM140Q9NV12 185 aa13.81□□□□□ -0.2
CLN6-220ENST00000637450 THYN1Q9P016 225 aa13.81□□□□□ -0.2
CLN6-220ENST00000637450 MRPL27Q9P0M9 148 aaKnown RBP13.81□□□□□ -0.2
CLN6-220ENST00000637450 S1PR2O95136 353 aa13.8□□□□□ -0.2
CLN6-220ENST00000637450 GPR183P32249 361 aa13.8□□□□□ -0.2
CLN6-220ENST00000637450 ELLP55199 621 aaPredicted RBP13.8□□□□□ -0.2
CLN6-220ENST00000637450 ZNF585BQ52M93 769 aa13.8□□□□□ -0.2
CLN6-220ENST00000637450 AADACL3Q5VUY0 350 aa13.8□□□□□ -0.2
CLN6-220ENST00000637450 DHRS11Q6UWP2 260 aa13.8□□□□□ -0.2
CLN6-220ENST00000637450 TMEM17Q86X19 198 aa13.8□□□□□ -0.2
CLN6-220ENST00000637450 DMBX1Q8NFW5 382 aa13.8□□□□□ -0.2
CLN6-220ENST00000637450 OR10W1Q8NGF6 305 aa13.8□□□□□ -0.2
CLN6-220ENST00000637450 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
CLN6-220ENST00000637450 QTRT1Q9BXR0 403 aaKnown RBP13.8□□□□□ -0.2
CLN6-220ENST00000637450 ZNF436Q9C0F3 470 aaPredicted RBP13.8□□□□□ -0.2
CLN6-220ENST00000637450 IGHV3-35A0A0C4DH35 117 aa13.79□□□□□ -0.2
CLN6-220ENST00000637450 TEX50A0A1B0GTY4 177 aa13.79□□□□□ -0.2
CLN6-220ENST00000637450 MEIS3P1A6NDR6 274 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms