RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 NDUFS6O75380 124 aaKnown RBP5.51□□□□□ -1.53
SCN2A-216ENST00000637367 CXCL1P09341 107 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 GFRA1P56159 465 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 PRB3Q04118 309 aaPredicted RBP5.51□□□□□ -1.53
SCN2A-216ENST00000637367 GCSAMLQ5JQS6 135 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 WDR31Q8NA23 367 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 LYZL4Q96KX0 146 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 SIGLEC12Q96PQ1 595 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 PMCHL2Q9BQD1 86 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 MRPL13Q9BYD1 178 aaKnown RBP5.51□□□□□ -1.53
SCN2A-216ENST00000637367 PKIBQ9C010 78 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 VSIRQ9H7M9 311 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 SDF2L1Q9HCN8 221 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 HSPB7Q9UBY9 170 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 HIGD1AQ9Y241 93 aa5.51□□□□□ -1.53
SCN2A-216ENST00000637367 SONP18583 2426 aaKnown RBP5.51□□□□□ -1.53
SCN2A-216ENST00000637367 TNS1Q9HBL0 1735 aaKnown RBP5.51□□□□□ -1.53
SCN2A-216ENST00000637367 SBF1O95248 1867 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 IGHV3OR16-8A0A075B7F1 116 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 ZNF716A6NP11 495 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 FAM90A26D6RGX4 464 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 F8VVB4 439 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 F8VWA3 439 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 NPIPB7O75200 414 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 FGF5P12034 268 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 CD33P20138 364 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 CEACAM3P40198 252 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 RPL13AP40429 203 aaKnown RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 RPL23P62829 140 aaKnown RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 TM4SF20Q53R12 229 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 ZNF525Q8N782 197 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 LSM10Q969L4 123 aaKnown RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 CDX2Q99626 313 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 PSMG3Q9BT73 122 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 FAM117AQ9C073 453 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 DNAJC4Q9NNZ3 241 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 ZNF581Q9P0T4 197 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 TBL2Q9Y4P3 447 aaKnown RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 MED13Q9UHV7 2174 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 CSPG4Q6UVK1 2322 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 RBBP6Q7Z6E9 1792 aaKnown RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 DPRXA6NFQ7 191 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 H7C2G1 150 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 IGFBP2P18065 325 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 GPR6P46095 362 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 TFPI2P48307 235 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 TWIST1Q15672 202 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 LRRC75BQ2VPJ9 315 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 SPANXN1Q5VSR9 72 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 RAB1CQ92928 201 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 TMEM45BQ96B21 275 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 FOXD3Q9UJU5 478 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 C2CD3Q4AC94 2353 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 C16orf97H3BN30 126 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 CELA3BP08861 270 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 FCGR2BP31994 310 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 CKS2P33552 79 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 LGALS7P47929 136 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 FOXG1P55316 489 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 SLC25A34Q6PIV7 304 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 GOLT1AQ6ZVE7 132 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 PPP1R32Q7Z5V6 425 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 OR13A1Q8NGR1 328 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 OR5P3Q8WZ94 311 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 FAM131CQ96AQ9 280 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 ZNF714Q96N38 554 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 SLC25A33Q9BSK2 321 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 CYTL1Q9NRR1 136 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 GOLGB1Q14789 3259 aaKnown RBP5.5□□□□□ -1.53
SCN2A-216ENST00000637367 SCN4AP35499 1836 aa5.5□□□□□ -1.53
SCN2A-216ENST00000637367 TCF20Q9UGU0 1960 aaKnown RBP5.49□□□□□ -1.53
SCN2A-216ENST00000637367 IGKV1-12A0A0C4DH73 117 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 LOC390937A0A1W2PQ73 354 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 EFNA2O43921 213 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 SERF1AO75920 110 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 IGKV1D-12P01611 117 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 IL6RP08887 468 aaPredicted RBP5.49□□□□□ -1.53
SCN2A-216ENST00000637367 TNFSF10P50591 281 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 MBNL2Q5VZF2 373 aaKnown RBP5.49□□□□□ -1.53
SCN2A-216ENST00000637367 FGFBP3Q8TAT2 258 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 TMEM54Q969K7 222 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 GUCD1Q96NT3 240 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 TMEM208Q9BTX3 173 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 MS4A5Q9H3V2 200 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 ZNF430Q9H8G1 570 aaPredicted RBP5.49□□□□□ -1.53
SCN2A-216ENST00000637367 RABAC1Q9UI14 185 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 LOC107984156A0A0G2JMH3 177 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 M0QZ24 198 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 C2orf83Q53S99 150 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 DGAT2L7PQ6IED9 249 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 ARL17AQ8IVW1 177 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 PLPPR1Q8TBJ4 325 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 C18orf15Q96N68 181 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 IER2Q9BTL4 223 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 PRDM6Q9NQX0 595 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 AP5S1Q9NUS5 200 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 PSME4Q14997 1843 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 ADCYAP1P18509 176 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 ERVFRD-1P60508 538 aa5.49□□□□□ -1.53
SCN2A-216ENST00000637367 CRIPAKQ8N1N5 446 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms