RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 ATG4DQ86TL0 474 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-238ENST00000637276 A0A096LPF7 62 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 MPV17P39210 176 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 TMEM52Q8NDY8 209 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 ZNF430Q9H8G1 570 aaPredicted RBP13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 JPT2Q9H910 190 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 PDCD11Q14690 1871 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 ZNF562Q6V9R5 426 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 MARVELD1Q9BSK0 173 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 H3BRM9 83 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 PEX11BO96011 259 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 TRGC1P0CF51 173 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 CTAG1AP78358 180 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 MDS2Q8NDY4 140 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 A0A1W2PQM1 296 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 PPP1R27Q86WC6 154 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 CASP8AP2Q9UKL3 1982 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 A0A1B0GV90 55 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 GATA4P43694 442 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 NABP2Q9BQ15 211 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 SDF2L1Q9HCN8 221 aa13.97□□□□□ -0.17
CACNA1A-238ENST00000637276 DMKNQ6E0U4 476 aaPredicted RBP13.96□□□□□ -0.17
CACNA1A-238ENST00000637276 VSIG8P0DPA2 414 aa13.96□□□□□ -0.17
CACNA1A-238ENST00000637276 VKORC1Q9BQB6 163 aa13.96□□□□□ -0.17
CACNA1A-238ENST00000637276 CTXND1A0A1B0GTU2 59 aa13.96□□□□□ -0.17
CACNA1A-238ENST00000637276 HMSDA8MTL9 139 aa13.96□□□□□ -0.17
CACNA1A-238ENST00000637276 CD28P10747 220 aa13.96□□□□□ -0.17
CACNA1A-238ENST00000637276 SPCS1Q9Y6A9 102 aa13.96□□□□□ -0.17
CACNA1A-238ENST00000637276 FAM110DQ8TAY7 271 aaPredicted RBP13.96□□□□□ -0.18
CACNA1A-238ENST00000637276 DMRT1Q9Y5R6 373 aa13.96□□□□□ -0.18
CACNA1A-238ENST00000637276 SIRT4Q9Y6E7 314 aaPredicted RBP13.96□□□□□ -0.18
CACNA1A-238ENST00000637276 ZNF414Q96IQ9 312 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 LRRC3BQ96PB8 259 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 TGFBR3LH3BV60 316 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 BSPH1Q075Z2 132 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 COL25A1Q9BXS0 654 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 ZNF114Q8NC26 417 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 ST6GALNAC2Q9UJ37 374 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 IGKV1D-16P01601 117 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 FGF9P31371 208 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 ZNF474Q6S9Z5 364 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 TMEM174Q8WUU8 243 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 OR2K2Q8NGT1 345 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 NAA38Q9BRA0 125 aaKnown RBP13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 SLC25A2Q9BXI2 301 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 C21orf62Q9NYP8 219 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 C21orf140B9A014 251 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 LIPFP07098 398 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 AICDAQ9GZX7 198 aa13.95□□□□□ -0.18
CACNA1A-238ENST00000637276 NACAE9PAV3 2078 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 IGHV1-45A0A0A0MS14 117 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 M0QZK8 103 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 CXCL2P19875 107 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 ISXQ2M1V0 245 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 ZNF600Q6ZNG1 722 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 NFAM1Q8NET5 270 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 SIGLEC12Q96PQ1 595 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 A0A0J9YW62 118 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 KCNE5Q9UJ90 142 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 PAX4O43316 350 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 PRTN3P24158 256 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 PEBP1P30086 187 aaKnown RBP13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 DEGS2Q6QHC5 323 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 METRNQ9UJH8 293 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 TRAV8-4A0A0B4J246 113 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 H0YL77 283 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 FOLR2P14207 255 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 SRSF6Q13247 344 aaKnown RBP13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 SLC25A34Q6PIV7 304 aa13.94□□□□□ -0.18
CACNA1A-238ENST00000637276 OGG1O15527 345 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 HOXA6P31267 233 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 TEX45Q8NA69 505 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 CYSLTR1Q9Y271 337 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 FHITP49789 147 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 TMEM252Q8N6L7 170 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 C17orf51A8MQB3 221 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 ZIC1Q15915 447 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 GPR132Q9UNW8 380 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 HLA-DRB1P01911 266 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 NANOS3P60323 173 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 TMEM167AQ8TBQ9 72 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 SSBP4Q9BWG4 385 aaPredicted RBP13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 SRXN1Q9BYN0 137 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 VCX2Q9H322 139 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 TCF24Q7RTU0 167 aa13.93□□□□□ -0.18
CACNA1A-238ENST00000637276 SPTA1P02549 2419 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 MEGF9Q9H1U4 602 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 ATRXP46100 2492 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 SMRP1Q8NCR6 262 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 KLF14Q8TD94 323 aaPredicted RBP13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 POLR2AP24928 1970 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 TRAV40A0A0B4J280 105 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 CGAP01215 116 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 TNFSF10P50591 281 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 PLCH1Q4KWH8 1693 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 RPL34P49207 117 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 CLPSL2Q6UWE3 100 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 DERL1Q9BUN8 251 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 FOCADQ5VW36 1801 aa13.92□□□□□ -0.18
CACNA1A-238ENST00000637276 CENPWQ5EE01 88 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms