RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 IZUMO4Q1ZYL8 232 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 ZNF585BQ52M93 769 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 FAM162BQ5T6X4 162 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 ETFRF1Q6IPR1 90 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 VHLLQ6RSH7 139 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 Q6ZRM9 215 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 RPP25LQ8N5L8 163 aaKnown RBP3.33□□□□□ -1.88
SCN1A-214ENST00000637038 C1orf162Q8NEQ5 155 aaPredicted RBP3.33□□□□□ -1.88
SCN1A-214ENST00000637038 MRGPRDQ8TDS7 321 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 ABHD5Q8WTS1 349 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 WDYHV1Q96HA8 205 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 OR2J1Q9GZK6 312 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 VSIRQ9H7M9 311 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 PATZ1Q9HBE1 687 aaKnown RBP3.33□□□□□ -1.88
SCN1A-214ENST00000637038 NGBQ9NPG2 151 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 SLC35D1Q9NTN3 355 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 CLEC5AQ9NY25 188 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 WDR83OSQ9Y284 106 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 RFNGQ9Y644 331 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 KIAA1324LA8MWY0 1029 aaPredicted RBP3.33□□□□□ -1.88
SCN1A-214ENST00000637038 M0R1X1 148 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 TMPRSS2O15393 492 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 ZG16O60844 167 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 FCGR3BO75015 233 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 RHBDL1O75783 438 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 NEURL1O76050 574 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 IGKV1-39P01597 117 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 IGKV1D-39P04432 117 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 TNFSF4P23510 183 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 UBE2G2P60604 165 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 FOXL1Q12952 345 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 RPEL1Q2QD12 228 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 ZNF766Q5HY98 468 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 ACSM6Q6P461 480 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 MYPOPQ86VE0 399 aaPredicted RBP3.33□□□□□ -1.88
SCN1A-214ENST00000637038 TGIF2LXQ8IUE1 241 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 SARAFQ96BY9 339 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 DIRC2Q96SL1 478 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 DEFB127Q9H1M4 99 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 LY96Q9Y6Y9 160 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 ARL2-SNX15V9GYD0 113 aa3.33□□□□□ -1.88
SCN1A-214ENST00000637038 TRAV39A0A0B4J263 110 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 PINLYPA6NC86 204 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 MGST3O14880 152 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 WISP2O76076 250 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 BRI3O95415 125 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 ERVK11-1P61568 191 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 PAX5Q02548 391 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 ARL16Q0P5N6 197 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 VWC2Q2TAL6 325 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 GCSAMQ8N6F7 178 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 SIGLECL1Q8N7X8 197 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 CNEP1R1Q8N9A8 125 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.32□□□□□ -1.88
SCN1A-214ENST00000637038 OR52L2PQ8NGH6 319 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 UBALD1Q8TB05 177 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 SFRP2Q96HF1 295 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 RHOVQ96L33 236 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 C19orf24Q9BVV8 132 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 PRDM13Q9H4Q3 707 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 GSX1Q9H4S2 264 aaPredicted RBP3.32□□□□□ -1.88
SCN1A-214ENST00000637038 NPVFQ9HCQ7 196 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 PLA2G3Q9NZ20 509 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 NAGKQ9UJ70 344 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 PRNDQ9UKY0 176 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 PXMP4Q9Y6I8 212 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 ARID1AO14497 2285 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 LIPFP07098 398 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 CRYGCP07315 174 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 IRF2P14316 349 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 CRISP2P16562 243 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 NUTF2P61970 127 aaKnown RBP3.32□□□□□ -1.88
SCN1A-214ENST00000637038 EDDM3AQ14507 147 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 Q5PR19 223 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 GFI1BQ5VTD9 330 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 TEPPQ6URK8 271 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 ACP7Q6ZNF0 438 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 HAPLN4Q86UW8 402 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 LRRC29Q8WV35 223 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 ZNF479Q96JC4 524 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 VKORC1Q9BQB6 163 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 FGF23Q9GZV9 251 aaPredicted RBP3.32□□□□□ -1.88
SCN1A-214ENST00000637038 TECRQ9NZ01 308 aaKnown RBP3.32□□□□□ -1.88
SCN1A-214ENST00000637038 A0A1W2PR80 420 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 NDUFB4O95168 129 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 NPY1RP25929 384 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 CA7P43166 264 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 GNG4P50150 75 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 PDLIM4P50479 330 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 ADORA2A-AS1P86434 159 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 TFF3Q07654 80 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 AESQ08117 197 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 GBGT1Q8N5D6 347 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 MISP3Q96FF7 219 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 SLC35E1Q96K37 410 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 VAMP8Q9BV40 100 aa3.32□□□□□ -1.88
SCN1A-214ENST00000637038 IFITM10A6NMD0 228 aa3.31□□□□□ -1.88
SCN1A-214ENST00000637038 C17orf98A8MV24 154 aa3.31□□□□□ -1.88
SCN1A-214ENST00000637038 FNDC10F2Z333 226 aa3.31□□□□□ -1.88
SCN1A-214ENST00000637038 GZMBP10144 247 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms