RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 MZT1Q08AG7 82 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 TESK1Q15569 626 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 LTC4SQ16873 150 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 OR52L2PQ8NGH6 319 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 OR10V1Q8NGI7 309 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 OR1P1Q8NH06 330 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 PLPPR2Q96GM1 343 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 C18orf12Q96KH6 178 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 CABLES2Q9BTV7 478 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 MEGF9Q9H1U4 602 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 MBNL3Q9NUK0 354 aaKnown RBP9.57□□□□□ -0.88
CLN6-217ENST00000636964 KCNIP1Q9NZI2 227 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 KCNS2Q9ULS6 477 aa9.57□□□□□ -0.88
CLN6-217ENST00000636964 IGHV3-43A0A0B4J1X8 118 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 SRRM5B3KS81 715 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 CCL21O00585 134 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 IGHV3-43DP0DP04 118 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 MMP9P14780 707 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 SSTR5P35346 364 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 ZNF506Q5JVG8 444 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 PRR27Q6MZM9 219 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 ZNF695Q8IW36 515 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 OR13A1Q8NGR1 328 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 KIAA1456Q9P272 454 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 ASH1LQ9NR48 2969 aaKnown RBP9.56□□□□□ -0.88
CLN6-217ENST00000636964 RAMP3O60896 148 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 GRNP28799 593 aaKnown RBP9.56□□□□□ -0.88
CLN6-217ENST00000636964 GNMTQ14749 295 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 WDR25Q64LD2 544 aaPredicted RBP9.56□□□□□ -0.88
CLN6-217ENST00000636964 C1orf87Q8N0U7 546 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 OR2G3Q8NGZ4 309 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 NEUROG1Q92886 237 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 NIPSNAP3BQ9BS92 247 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 TMEM222Q9H0R3 208 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 SVEP1Q4LDE5 3571 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 A0A1B0GU03 582 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 IGSF23A1L1A6 192 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 NKX2-6A6NCS4 301 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 DEFB108AA8MXU0 73 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 NXPH3O95157 252 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 EWSR1Q01844 656 aaKnown RBP eCLIP9.56□□□□□ -0.887e-6■■□□□ 12.2
CLN6-217ENST00000636964 TPTE2P1Q5T6R2 138 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 GPR157Q5UAW9 335 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 MOB1BQ7L9L4 216 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 MRPL52Q86TS9 123 aaKnown RBP9.56□□□□□ -0.88
CLN6-217ENST00000636964 LINC01560Q8TB33 94 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 ORAOV1Q8WV07 137 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 CITED2Q99967 270 aaPredicted RBP9.56□□□□□ -0.88
CLN6-217ENST00000636964 VCX2Q9H322 139 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 GCM1Q9NP62 436 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 PSG11Q9UQ72 335 aa9.56□□□□□ -0.88
CLN6-217ENST00000636964 HBZP02008 142 aa9.55□□□□□ -0.88
CLN6-217ENST00000636964 HSPB1P04792 205 aaKnown RBP9.55□□□□□ -0.88
CLN6-217ENST00000636964 PLA2G5P39877 138 aa9.55□□□□□ -0.88
CLN6-217ENST00000636964 RUNX1Q01196 453 aa9.55□□□□□ -0.88
CLN6-217ENST00000636964 SLC35E4Q6ICL7 350 aa9.55□□□□□ -0.88
CLN6-217ENST00000636964 DUX4L9Q6RFH8 374 aaPredicted RBP9.55□□□□□ -0.88
CLN6-217ENST00000636964 TRBV24-1A0A075B6N3 115 aa9.55□□□□□ -0.88
CLN6-217ENST00000636964 FAM24AA6NFZ4 105 aa9.55□□□□□ -0.88
CLN6-217ENST00000636964 IGLV2-14P01704 120 aa9.55□□□□□ -0.88
CLN6-217ENST00000636964 PAX5Q02548 391 aa9.55□□□□□ -0.88
CLN6-217ENST00000636964 PRR7Q8TB68 274 aa9.55□□□□□ -0.88
CLN6-217ENST00000636964 GALMQ96C23 342 aa9.55□□□□□ -0.88
CLN6-217ENST00000636964 POLR3KQ9Y2Y1 108 aaPredicted RBP9.55□□□□□ -0.88
CLN6-217ENST00000636964 IGHV3-7P01780 117 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 EDDM3BP56851 147 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 CDSNQ15517 529 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 LRTM2Q8N967 370 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 TMEM186Q96B77 213 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 SLC35E1Q96K37 410 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 DSCAMO60469 2012 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 ZNF737O75373 536 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 ELLP55199 621 aaPredicted RBP9.54□□□□□ -0.88
CLN6-217ENST00000636964 GNB2P62879 340 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 IZUMO4Q1ZYL8 232 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 COA6Q5JTJ3 125 aaKnown RBP9.54□□□□□ -0.88
CLN6-217ENST00000636964 NUP37Q8NFH4 326 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 ITPR1Q14643 2758 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 OOEPA6NGQ2 149 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 SIVA1O15304 175 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 F2RP25116 425 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 CA7P43166 264 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 LINC01551Q86U37 167 aa9.54□□□□□ -0.88
CLN6-217ENST00000636964 ZNF808Q8N4W9 903 aaPredicted RBP9.54□□□□□ -0.88
CLN6-217ENST00000636964 DYSFO75923 2080 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 ADAM20O43506 726 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 SAP30O75446 220 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 LHBP01229 141 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 OMGP23515 440 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 TMEM249Q2WGJ8 235 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 RNF7Q9UBF6 113 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 KIR2DL5BA0A0G2JN68 375 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 KIR2DL5BA0A0G2JPC4 375 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 CDS2O95674 445 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 TGFAP01135 160 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 GCGP01275 180 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 TNFSF4P23510 183 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 KIR2DL5AQ8N109 375 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 MAGT1Q9H0U3 335 aa9.53□□□□□ -0.88
CLN6-217ENST00000636964 LOC102723971A0A1B0GUV8 181 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms