RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 RNASE11Q8TAA1 199 aaKnown RBP6.43□□□□□ -1.38
PNKP-226ENST00000636840 S100ZQ8WXG8 99 aa6.43□□□□□ -1.38
PNKP-226ENST00000636840 RRNAD1Q96FB5 475 aaKnown RBP6.43□□□□□ -1.38
PNKP-226ENST00000636840 USMG5Q96IX5 58 aa6.43□□□□□ -1.38
PNKP-226ENST00000636840 TMEM56Q96MV1 263 aa6.43□□□□□ -1.38
PNKP-226ENST00000636840 MS4A10Q96PG2 267 aa6.43□□□□□ -1.38
PNKP-226ENST00000636840 FYTTD1Q96QD9 318 aaKnown RBP6.43□□□□□ -1.38
PNKP-226ENST00000636840 SLC25A21Q9BQT8 299 aaPredicted RBP6.43□□□□□ -1.38
PNKP-226ENST00000636840 MCRIP2Q9BUT9 160 aaKnown RBP6.43□□□□□ -1.38
PNKP-226ENST00000636840 GPR61Q9BZJ8 451 aa6.43□□□□□ -1.38
PNKP-226ENST00000636840 TMEM140Q9NV12 185 aa6.43□□□□□ -1.38
PNKP-226ENST00000636840 PRNDQ9UKY0 176 aa6.43□□□□□ -1.38
PNKP-226ENST00000636840 FBXO7Q9Y3I1 522 aa6.43□□□□□ -1.38
PNKP-226ENST00000636840 V9GYH0 126 aa6.43□□□□□ -1.38
PNKP-226ENST00000636840 MGAM2Q2M2H8 2515 aa6.43□□□□□ -1.38
PNKP-226ENST00000636840 ADARB2-AS1A8MUL3 147 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 CCL24O00175 119 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 BRI3O95415 125 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 DUS4LO95620 317 aaKnown RBP6.42□□□□□ -1.38
PNKP-226ENST00000636840 TSPAN15O95858 294 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 TRAPPC2P0DI81 140 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 TRAPPC2BP0DI82 140 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 DEFA4P12838 97 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 HIST1H1BP16401 226 aaKnown RBP6.42□□□□□ -1.38
PNKP-226ENST00000636840 G6PCP35575 357 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 AKR1C2P52895 323 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 TPPP2P59282 170 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 CNPY1Q3B7I2 92 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 FAM209BQ5JX69 171 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 FAAP20Q6NZ36 180 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 C8orf86Q6ZUL3 223 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 TTC9CQ8N5M4 171 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 OR1N2Q8NGR9 330 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 C4orf3Q8WVX3 66 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 C7orf50Q9BRJ6 194 aaKnown RBP6.42□□□□□ -1.38
PNKP-226ENST00000636840 SRSF8Q9BRL6 282 aaKnown RBP6.42□□□□□ -1.38
PNKP-226ENST00000636840 PDCD10Q9BUL8 212 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 SRRQ9GZT4 340 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 KLK15Q9H2R5 256 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 THYN1Q9P016 225 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 ZMAT5Q9UDW3 170 aaKnown RBP6.42□□□□□ -1.38
PNKP-226ENST00000636840 CACFD1Q9UGQ2 172 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 NOTCH3Q9UM47 2321 aa6.42□□□□□ -1.38
PNKP-226ENST00000636840 NBEAL1Q6ZS30 2694 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 IL6RP08887 468 aaPredicted RBP6.41□□□□□ -1.38
PNKP-226ENST00000636840 AKR1C4P17516 323 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 RAB25P57735 213 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 RUNX1Q01196 453 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 ATP5G2Q06055 141 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 KLF9Q13886 244 aaPredicted RBP6.41□□□□□ -1.38
PNKP-226ENST00000636840 ZNF79Q15937 498 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 TATDN3Q17R31 274 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 C19orf54Q5BKX5 351 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 FOXB2Q5VYV0 432 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 HIST2H2BDQ6DRA6 164 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 FAM219AQ8IW50 185 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 WFDC9Q8NEX5 89 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 OR11H1Q8NG94 326 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 OR1L6Q8NGR2 347 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 OR5B3Q8NH48 314 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 SEC22AQ96IW7 307 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 RTBDNQ9BSG5 229 aaPredicted RBP6.41□□□□□ -1.38
PNKP-226ENST00000636840 HINT2Q9BX68 163 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 QTRT1Q9BXR0 403 aaKnown RBP6.41□□□□□ -1.38
PNKP-226ENST00000636840 NAA60Q9H7X0 242 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 RANGRFQ9HD47 186 aaPredicted RBP6.41□□□□□ -1.38
PNKP-226ENST00000636840 ZNF257Q9Y2Q1 563 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 OR51B2Q9Y5P1 312 aa6.41□□□□□ -1.38
PNKP-226ENST00000636840 TEX50A0A1B0GTY4 177 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 HMX3A6NHT5 357 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 CRYM-AS1A6NIL9 109 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 FAM223BA6NKX1 122 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 NPIPB5A8MRT5 1133 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 I3L521 148 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 SOX15O60248 233 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 HSPB1P04792 205 aaKnown RBP6.4□□□□□ -1.38
PNKP-226ENST00000636840 OR8U8P0C7N1 319 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 APELAP0DMC3 54 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 UCP1P25874 307 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 PSMB6P28072 239 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 MECP2P51608 486 aaKnown RBP6.4□□□□□ -1.38
PNKP-226ENST00000636840 HSPE1P61604 102 aaKnown RBP6.4□□□□□ -1.38
PNKP-226ENST00000636840 SRPXP78539 464 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 ERHP84090 104 aaKnown RBP6.4□□□□□ -1.38
PNKP-226ENST00000636840 ZNF616Q08AN1 781 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 RBMS2Q15434 407 aaKnown RBP6.4□□□□□ -1.38
PNKP-226ENST00000636840 BAK1Q16611 211 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 MRGPRG-AS1Q2M3A8 158 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 SP6Q3SY56 376 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 TMEM128Q5BJH2 165 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 FAM223AQ8IWN6 122 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 NECAP1Q8NC96 275 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 ADAD2Q8NCV1 583 aaKnown RBP6.4□□□□□ -1.38
PNKP-226ENST00000636840 MYOZ3Q8TDC0 251 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 TRIM63Q969Q1 353 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 MRGPRFQ96AM1 343 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 RCC1LQ96I51 464 aaKnown RBP6.4□□□□□ -1.38
PNKP-226ENST00000636840 OR5B12Q96R08 314 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 TP53RKQ96S44 253 aa6.4□□□□□ -1.38
PNKP-226ENST00000636840 CCDC32Q9BV29 185 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms