RNA–Protein interactions for RNA: ENST00000636751.2

TCF4-280, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 8,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-280	ENST00000636751	EMG1	Q92979	244 aa	Known RBP	4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	CLN8	Q9UBY8	286 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	TRAV9-1	A0A075B6T8	112 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	ODAM	A1E959	279 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	MFNG	O00587	321 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	MGP	P08493	103 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	CRYBA4	P53673	196 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	RPL18	Q07020	188 aa	Known RBP	4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	UBE2V1	Q13404	147 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	IGFL2	Q6UWQ7	119 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	ATG4D	Q86TL0	474 aa	Predicted RBP	4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	MARCH3	Q86UD3	253 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	LRRC18	Q8N456	261 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	ESAM	Q96AP7	390 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	LOC105371242	A0A075B767	164 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	PPIAL4C	A0A0B4J2A2	164 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	OR2T8	A6NH00	312 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751		A8MWV9	139 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	SNRPC	P09234	159 aa	Known RBP	4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	PPIAL4G	P0DN37	164 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	P2RY1	P47900	373 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	MMD	Q15546	238 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	ZNF774	Q6NX45	483 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	ARRDC1	Q8N5I2	433 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	ABHD4	Q8TB40	342 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	C4orf45	Q96LM5	186 aa		4.15	□□□□□ -1.74
TCF4-280	ENST00000636751	TFPI2	P48307	235 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	NHLRC3	Q5JS37	347 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	FNDC7	Q5VTL7	733 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	ASPHD2	Q6ICH7	369 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	PRSS57	Q6UWY2	283 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	OR8B12	Q8NGG6	310 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	OR4D5	Q8NGN0	318 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	DUSP21	Q9H596	190 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	ZNF593	O00488	134 aa	Predicted RBP	4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	NCR2	O95944	276 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	CCL4	P13236	92 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	NPC2	P61916	151 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	DTX1	Q86Y01	620 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	DEFB108B	Q8NET1	73 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	NUDT8	Q8WV74	236 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	PATE1	Q8WXA2	126 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	CST9L	Q9H4G1	147 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	ZNF665	Q9H7R5	613 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	FGF20	Q9NP95	211 aa	Predicted RBP	4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	EHF	Q9NZC4	300 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	TMEM233	B4DJY2	109 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	SNAI2	O43623	268 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	TCRB	P04435	133 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	ZNF708	P17019	499 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	TNFRSF1B	P20333	461 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	CDX1	P47902	265 aa	Predicted RBP	4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	ATP5J2	P56134	94 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	RPS20	P60866	119 aa	Known RBP	4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	BTG1	P62324	171 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	TBC1D26	Q86UD7	250 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	CLECL1	Q8IZS7	167 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	OTOS	Q8NHW6	89 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751		Q9N2K0	584 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	RNF7	Q9UBF6	113 aa		4.15	□□□□□ -1.75
TCF4-280	ENST00000636751	IGHV3OR16-12	A0A075B7B8	117 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	TRAV2	A0A0B4J234	112 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	NME4	O00746	187 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	CXCL13	O43927	109 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	FSTL3	O95633	263 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	FGF2	P09038	288 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	LAX1	Q8IWV1	398 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	OR10J6P	Q8NGY7	276 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	FAM168A	Q92567	244 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	ABHD14B	Q96IU4	210 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	MARVELD1	Q9BSK0	173 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	REPIN1	Q9BWE0	567 aa	Known RBP	4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	ADGRL4	Q9HBW9	690 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	ZNF257	Q9Y2Q1	563 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	MRPS16	Q9Y3D3	137 aa	Known RBP	4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	PPIAL4D	F5H284	164 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	WISP1	O95388	367 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	CSN3	P07498	182 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	FAM106CP	P0CH98	169 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	CGB7	P0DN87	165 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	HTN3	P15516	51 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	OLIG2	Q13516	323 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	CD226	Q15762	336 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	CEACAM16	Q2WEN9	425 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	PRTN3	P24158	256 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	SLC35E3	Q7Z769	313 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	VWCE	Q96DN2	955 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	WDR13	Q9H1Z4	485 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751		A0A0G2JLM5	398 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751		A0A1W2PRX2	142 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	C5orf49	A4QMS7	147 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	OR2H2	O95918	312 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	ZBTB25	P24278	435 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	OR1E2	P47887	323 aa		4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	HSPE1	P61604	102 aa	Known RBP	4.14	□□□□□ -1.75
TCF4-280	ENST00000636751	TMEM241	Q24JQ0	296 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms