RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 MIFP14174 115 aa13.09□□□□□ -0.31
CLN6-212ENST00000636020 IRF3Q14653 427 aa13.09□□□□□ -0.31
CLN6-212ENST00000636020 ZFP41Q8N8Y5 198 aa13.09□□□□□ -0.31
CLN6-212ENST00000636020 OR6M1Q8NGM8 313 aa13.09□□□□□ -0.31
CLN6-212ENST00000636020 OR4A4PQ8NGN8 299 aa13.09□□□□□ -0.31
CLN6-212ENST00000636020 SCRT1Q9BWW7 348 aa13.09□□□□□ -0.31
CLN6-212ENST00000636020 SCN3BQ9NY72 215 aa13.09□□□□□ -0.31
CLN6-212ENST00000636020 ETV7Q9Y603 341 aa13.09□□□□□ -0.31
CLN6-212ENST00000636020 MYCBP2O75592 4640 aa13.09□□□□□ -0.31
CLN6-212ENST00000636020 TMEM14DPA8MWL7 114 aa13.08□□□□□ -0.32
CLN6-212ENST00000636020 BET1O15155 118 aa13.08□□□□□ -0.32
CLN6-212ENST00000636020 TGOLN2O43493 480 aa13.08□□□□□ -0.32
CLN6-212ENST00000636020 DEFA4P12838 97 aa13.08□□□□□ -0.32
CLN6-212ENST00000636020 QRFPP83859 136 aa13.08□□□□□ -0.32
CLN6-212ENST00000636020 TNP2Q05952 138 aa13.08□□□□□ -0.32
CLN6-212ENST00000636020 IGSF11Q5DX21 431 aa13.08□□□□□ -0.32
CLN6-212ENST00000636020 AHSA2Q719I0 299 aa13.08□□□□□ -0.32
CLN6-212ENST00000636020 VKORC1L1Q8N0U8 176 aa13.08□□□□□ -0.32
CLN6-212ENST00000636020 TSPAN14Q8NG11 270 aa13.08□□□□□ -0.32
CLN6-212ENST00000636020 TRBV6-7A0A0A0MS04 114 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 EFCAB10A6NFE3 127 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 K7EMT4 169 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 REG1AP05451 166 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 PTBP1P26599 531 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLN6-212ENST00000636020 DCKP27707 260 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 MAS1LP35410 378 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 TFPI2P48307 235 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 PSMD7P51665 324 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 TMEM50BP56557 158 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 C12orf74Q32Q52 190 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 C1orf100Q5SVJ3 147 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 ZNF773Q6PK81 442 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 OR10J5Q8NHC4 309 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 RNF2Q99496 336 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 CMSS1Q9BQ75 279 aaKnown RBP13.07□□□□□ -0.32
CLN6-212ENST00000636020 DCUN1D5Q9BTE7 237 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 CABLES2Q9BTV7 478 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 MRPS26Q9BYN8 205 aaKnown RBP13.07□□□□□ -0.32
CLN6-212ENST00000636020 LPAR5Q9H1C0 372 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 HSF4Q9ULV5 492 aa13.07□□□□□ -0.32
CLN6-212ENST00000636020 A0A087WXM4 84 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 FOXI3A8MTJ6 420 aaPredicted RBP13.06□□□□□ -0.32
CLN6-212ENST00000636020 PTGES3LE9PB15 166 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 FABP7O15540 132 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 ZNF207O43670 478 aaKnown RBP13.06□□□□□ -0.32
CLN6-212ENST00000636020 FCGR3BO75015 233 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 KBTBD11O94819 623 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 IFNA21P01568 189 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 IFNA17P01571 189 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 CDK1P06493 297 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 GIG44P09565 113 aaPredicted RBP13.06□□□□□ -0.32
CLN6-212ENST00000636020 ARFRP1Q13795 201 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 FAM89BQ8N5H3 189 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 TMEM167AQ8TBQ9 72 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 OR2A7Q96R45 310 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 C20orf24Q9BUV8 137 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 CLEC2DQ9UHP7 191 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 CELA1Q9UNI1 258 aa13.06□□□□□ -0.32
CLN6-212ENST00000636020 RBM7Q9Y580 266 aaKnown RBP13.06□□□□□ -0.32
CLN6-212ENST00000636020 IGHV3OR16-8A0A075B7F1 116 aa13.05□□□□□ -0.32
CLN6-212ENST00000636020 ZNF705EA8MWA4 302 aaPredicted RBP13.05□□□□□ -0.32
CLN6-212ENST00000636020 NDUFA4O00483 81 aa13.05□□□□□ -0.32
CLN6-212ENST00000636020 RGS10O43665 173 aa13.05□□□□□ -0.32
CLN6-212ENST00000636020 ZNF767PQ75MW2 155 aa13.05□□□□□ -0.32
CLN6-212ENST00000636020 PRSS48Q7RTY5 328 aa13.05□□□□□ -0.32
CLN6-212ENST00000636020 UBE2DNLQ8IWF7 75 aa13.05□□□□□ -0.32
CLN6-212ENST00000636020 PUSL1Q8N0Z8 303 aaKnown RBP13.05□□□□□ -0.32
CLN6-212ENST00000636020 SMPXQ9UHP9 88 aa13.05□□□□□ -0.32
CLN6-212ENST00000636020 X6R8D5 127 aa13.05□□□□□ -0.32
CLN6-212ENST00000636020 AGRNO00468 2067 aa13.04□□□□□ -0.32
CLN6-212ENST00000636020 IRGMA1A4Y4 181 aa13.04□□□□□ -0.32
CLN6-212ENST00000636020 OR2T8A6NH00 312 aa13.04□□□□□ -0.32
CLN6-212ENST00000636020 CGB1A6NKQ9 187 aa13.04□□□□□ -0.32
CLN6-212ENST00000636020 CELP19835 753 aa13.04□□□□□ -0.32
CLN6-212ENST00000636020 ST3GAL4Q11206 333 aa13.04□□□□□ -0.32
CLN6-212ENST00000636020 SPARTQ8N0X7 666 aa13.04□□□□□ -0.32
CLN6-212ENST00000636020 ZNF485Q8NCK3 441 aa13.04□□□□□ -0.32
CLN6-212ENST00000636020 VSTM2AQ8TAG5 236 aa13.04□□□□□ -0.32
CLN6-212ENST00000636020 ARHGAP5-AS1Q96IT6 56 aa13.04□□□□□ -0.32
CLN6-212ENST00000636020 PNMA8CA0A1B0GUJ8 204 aa13.03□□□□□ -0.32
CLN6-212ENST00000636020 CHEK1O14757 476 aa13.03□□□□□ -0.32
CLN6-212ENST00000636020 DIRAS3O95661 229 aa13.03□□□□□ -0.32
CLN6-212ENST00000636020 VN1R17PQ8TDU5 208 aa13.03□□□□□ -0.32
CLN6-212ENST00000636020 BSCL2Q96G97 398 aaPredicted RBP13.03□□□□□ -0.32
CLN6-212ENST00000636020 TMEM80Q96HE8 168 aa13.03□□□□□ -0.32
CLN6-212ENST00000636020 URM1Q9BTM9 101 aaKnown RBP13.03□□□□□ -0.32
CLN6-212ENST00000636020 PECRQ9BY49 303 aa13.03□□□□□ -0.32
CLN6-212ENST00000636020 DIMT1Q9UNQ2 313 aaKnown RBP13.03□□□□□ -0.32
CLN6-212ENST00000636020 IGKV3-7A0A075B6H7 116 aa13.02□□□□□ -0.33
CLN6-212ENST00000636020 C15orf62A8K5M9 175 aa13.02□□□□□ -0.33
CLN6-212ENST00000636020 LIPKQ5VXJ0 399 aa13.02□□□□□ -0.33
CLN6-212ENST00000636020 FAM90A2PQ658T7 463 aa13.02□□□□□ -0.33
CLN6-212ENST00000636020 LRRTM1Q86UE6 522 aa13.02□□□□□ -0.33
CLN6-212ENST00000636020 RHPN1-AS1Q9BWJ2 59 aa13.02□□□□□ -0.33
CLN6-212ENST00000636020 CCDC90BQ9GZT6 254 aa13.02□□□□□ -0.33
CLN6-212ENST00000636020 THYN1Q9P016 225 aa13.02□□□□□ -0.33
CLN6-212ENST00000636020 BPNT1O95861 308 aa13.01□□□□□ -0.33
CLN6-212ENST00000636020 CD37P11049 281 aa13.01□□□□□ -0.33
CLN6-212ENST00000636020 ALDH3B2P48448 385 aa13.01□□□□□ -0.33
CLN6-212ENST00000636020 RPL30P62888 115 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms