RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 RPLP1P05386 114 aaKnown RBP6.67□□□□□ -1.34
CDKL5-209ENST00000635828 WT1-ASQ06250 92 aa6.67□□□□□ -1.34
CDKL5-209ENST00000635828 ZNF562Q6V9R5 426 aa6.67□□□□□ -1.34
CDKL5-209ENST00000635828 ZNF695Q8IW36 515 aa6.67□□□□□ -1.34
CDKL5-209ENST00000635828 CCDC71LQ8N9Z2 235 aa6.67□□□□□ -1.34
CDKL5-209ENST00000635828 WIPF2Q8TF74 440 aaPredicted RBP6.67□□□□□ -1.34
CDKL5-209ENST00000635828 ARPC1AQ92747 370 aa6.67□□□□□ -1.34
CDKL5-209ENST00000635828 RBPMSQ93062 196 aaKnown RBP6.67□□□□□ -1.34
CDKL5-209ENST00000635828 TSNAXQ99598 290 aaKnown RBP6.67□□□□□ -1.34
CDKL5-209ENST00000635828 CACNG5Q9UF02 275 aa6.67□□□□□ -1.34
CDKL5-209ENST00000635828 PPIFP30405 207 aaKnown RBP6.66□□□□□ -1.34
CDKL5-209ENST00000635828 COMPP49747 757 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-209ENST00000635828 DEFB136Q30KP8 78 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 VMA21Q3ZAQ7 101 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 WFDC12Q8WWY7 111 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 TMEM56Q96MV1 263 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 CITED2Q99967 270 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-209ENST00000635828 C7orf50Q9BRJ6 194 aaKnown RBP6.66□□□□□ -1.34
CDKL5-209ENST00000635828 TMEM56-RWDD3S4R434 201 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 NOTCH3Q9UM47 2321 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 CLPSL1A2RUU4 121 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 ST8SIA3O43173 380 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 IGHV3-23P01764 117 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 RRASP10301 218 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 MFAP2P55001 183 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 RPL8P62917 257 aaKnown RBP6.66□□□□□ -1.34
CDKL5-209ENST00000635828 DCTN2Q13561 401 aaKnown RBP6.66□□□□□ -1.34
CDKL5-209ENST00000635828 NMSQ5H8A3 153 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 CXorf66Q5JRM2 361 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-209ENST00000635828 H2BFWTQ7Z2G1 175 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 CENPVQ7Z7K6 275 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-209ENST00000635828 LYG2Q86SG7 212 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 OR5AU1Q8NGC0 362 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 TMEM167AQ8TBQ9 72 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 KCNAB3O43448 404 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 HRASP01112 189 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 CFHR3Q02985 330 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 C19orf54Q5BKX5 351 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 MZT2BQ6NZ67 158 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 TEX45Q8NA69 505 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 MARVELD1Q9BSK0 173 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 MAGT1Q9H0U3 335 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 C16orf95Q9H693 158 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 BET1LQ9NYM9 111 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 NUBP2Q9Y5Y2 271 aa6.66□□□□□ -1.34
CDKL5-209ENST00000635828 INMT-MINDY4F8WBC2 141 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 HLA-GP17693 338 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 ECI1P42126 302 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 GGNBP1Q5YKI7 109 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 PLET1Q6UQ28 207 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 UNQ5815/PRO19632Q6UWF5 114 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 DEDD2Q8WXF8 326 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 OR51B2Q9Y5P1 312 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 TATDN3Q17R31 274 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 C16orf82Q7Z2V1 217 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 CD300LFQ8TDQ1 290 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 TMEM158Q8WZ71 300 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 PHB2Q99623 299 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 ZC4H2Q9NQZ6 224 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 TMEM14BQ9NUH8 114 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 KCNIP3Q9Y2W7 256 aa6.65□□□□□ -1.34
CDKL5-209ENST00000635828 NOTCH1P46531 2555 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 TRAV41A0A0B4J266 112 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 IGLC7A0M8Q6 106 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 C15orf61A6NNL5 157 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 NDUFA7O95182 113 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 IGHV3-11P01762 117 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 IGF1P05019 195 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 S100GP29377 79 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 KIR2DS2P43631 304 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 RIPPLY3P57055 190 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 POU2AF1Q16633 256 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 MLANAQ16655 118 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 OR8H1Q8NGG4 311 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 OR4F5Q8NH21 305 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 SGMS2Q8NHU3 365 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 RNASE11Q8TAA1 199 aaKnown RBP6.65□□□□□ -1.35
CDKL5-209ENST00000635828 RNF5Q99942 180 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 RAB18Q9NP72 206 aa6.65□□□□□ -1.35
CDKL5-209ENST00000635828 A0A1B0GVG6 124 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 COMMD9Q9P000 198 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 PSMB11A5LHX3 300 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 ADARB2-AS1A8MUL3 147 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 FAM25EA8MYX2 175 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 M0QZK8 103 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 SPDEFO95238 335 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 DUS4LO95620 317 aaKnown RBP6.64□□□□□ -1.35
CDKL5-209ENST00000635828 TRBV12-3P01733 135 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 CXCL3P19876 107 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 ERVK-16P61578 105 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 KIAA0141Q14154 515 aaPredicted RBP6.64□□□□□ -1.35
CDKL5-209ENST00000635828 NSUN5P1Q3KNT7 163 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 KHDC1LQ5JSQ8 128 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 MITD1Q8WV92 249 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 NDUFA4L2Q9NRX3 87 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 ZNF355PQ9NSJ1 428 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 ALG5Q9Y673 324 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 MGAM2Q2M2H8 2515 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 C13orf42A0A1B0GVH6 325 aa6.64□□□□□ -1.35
CDKL5-209ENST00000635828 MECP2P51608 486 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms