RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 GATA4P43694 442 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 ATP5G3P48201 142 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 TMEM50BP56557 158 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 ZNF121P58317 390 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 HERV-K104P61576 105 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 RPS15AP62244 130 aaKnown RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 RPS16P62249 146 aaKnown RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 TNFAIP6P98066 277 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 HHEXQ03014 270 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 TLE1Q04724 770 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 DPTQ07507 201 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 SLC38A11Q08AI6 406 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 ARL16Q0P5N6 197 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 GAGE2BQ13066 116 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 MYBPHQ13203 477 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 FHL3Q13643 280 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 EDDM3AQ14507 147 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 TRIP6Q15654 476 aaKnown RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 EFNB3Q15768 340 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 MRPL23Q16540 153 aaKnown RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 TAL2Q16559 108 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 CDKN3Q16667 212 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 FAM106AQ4KMX7 169 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 GAGE13Q4V321 117 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 GAGE2EQ4V326 116 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 SPRNQ5BIV9 151 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 NMSQ5H8A3 153 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 UTF1Q5T230 341 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 IER5LQ5T953 404 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 LYRM7Q5U5X0 104 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 CFAP126Q5VTH2 177 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 FNDC7Q5VTL7 733 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 LYSMD4Q5XG99 296 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 OTPQ5XKR4 325 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 RHBDD2Q6NTF9 364 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 SLC48A1Q6P1K1 146 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 Q6P435 159 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 ZNF474Q6S9Z5 364 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 LINC00114Q6XXX2 140 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 H1FNTQ75WM6 255 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 ATP5L2Q7Z4Y8 100 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 ANKRD37Q7Z713 158 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 WDR5BQ86VZ2 330 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 TMEM219Q86XT9 240 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 ZNF695Q8IW36 515 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 OSR2Q8N2R0 312 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 LRRC25Q8N386 305 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 RPP25LQ8N5L8 163 aaKnown RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 FADS6Q8N9I5 356 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 TEX45Q8NA69 505 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 DCAF4L2Q8NA75 395 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 SUMF1Q8NBK3 374 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 TMEM178AQ8NBL3 297 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 OR10G7Q8NGN6 311 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 OR10J6PQ8NGY7 276 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 OR51H1Q8NH63 302 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 ZNRF2Q8NHG8 242 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 BAHD1Q8TBE0 780 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 PHLDA1Q8WV24 401 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 LRRC29Q8WV35 223 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 GTSF1Q8WW33 167 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 SOCS4Q8WXH5 440 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 PIGCQ92535 297 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 TAF15Q92804 592 aaKnown RBP eCLIP1.6□□□□□ -2.15
TCF4-264ENST00000628391 FAM131CQ96AQ9 280 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 RPEQ96AT9 228 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 RAB37Q96AX2 223 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 CNRIP1Q96F85 164 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 ARHGAP5-AS1Q96IT6 56 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 C1orf147Q96MC9 270 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 PRELID3AQ96N28 172 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 OR4C12Q96R67 309 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 CDX2Q99626 313 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 ASCL2Q99929 193 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 RASL11BQ9BPW5 248 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 NAA38Q9BRA0 125 aaKnown RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 TMEM204Q9BSN7 226 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 TMEM147Q9BVK8 224 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 SSBP3Q9BWW4 388 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 SPANXDQ9BXN6 97 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 CFHR5Q9BXR6 569 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 GOLGA2P5Q9HBQ8 144 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 FAM60AQ9NP50 221 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 ZNF331Q9NQX6 463 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 PRTFDC1Q9NRG1 225 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 OSTCQ9NRP0 149 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 TNFRSF19Q9NS68 423 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 TMEM160Q9NX00 188 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 HIGD1BQ9P298 99 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 GAGE2DQ9UEU5 116 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 SSUH2Q9Y2M2 353 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.6□□□□□ -2.15
TCF4-264ENST00000628391 OR1A2Q9Y585 309 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 HILPDAQ9Y5L2 63 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 R4GN57 208 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 V9GYV3 84 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 HLA-DRB4X5D2U9 266 aa1.6□□□□□ -2.15
TCF4-264ENST00000628391 FANCMQ8IYD8 2048 aa1.59□□□□□ -2.15
TCF4-264ENST00000628391 SCN3AQ9NY46 2000 aa1.59□□□□□ -2.15
TCF4-264ENST00000628391 DNAJC25-GNG10A0A024R161 153 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms