RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 DNLZQ5SXM8 178 aa10.83□□□□□ -0.67
SCN8A-209ENST00000627620 NHLRC3Q5JS37 347 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 S4R3C0 116 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 LGALS3P17931 250 aaKnown RBP10.83□□□□□ -0.68
SCN8A-209ENST00000627620 EGR1P18146 543 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 PSG7Q13046 419 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 CENPWQ5EE01 88 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 ZNF837Q96EG3 531 aaPredicted RBP10.83□□□□□ -0.68
SCN8A-209ENST00000627620 IFI27L2Q9H2X8 130 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 A1L4Q6 167 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 IGKV1D-33P01593 117 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 IGKV1-33P01594 117 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 CD8AP01732 235 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 PRSS2P07478 247 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 MRPL14Q6P1L8 145 aaKnown RBP10.83□□□□□ -0.68
SCN8A-209ENST00000627620 NEU4Q8WWR8 484 aaPredicted RBP10.83□□□□□ -0.68
SCN8A-209ENST00000627620 NPCDR1Q9BY65 106 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 C17orf98A8MV24 154 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 ICAM4Q14773 271 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 SMUG1Q53HV7 270 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 OR10AG1Q8NH19 301 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 LRRC37AA6NMS7 1700 aa10.83□□□□□ -0.68
SCN8A-209ENST00000627620 IGHV3-49A0A0A0MS15 119 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 RBFOX2O43251 390 aaKnown RBP eCLIP10.82□□□□□ -0.68
SCN8A-209ENST00000627620 FOLR2P14207 255 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 PLAURQ03405 335 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 SAPCD1Q5SSQ6 148 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 ZNF385CQ66K41 422 aaPredicted RBP10.82□□□□□ -0.68
SCN8A-209ENST00000627620 OR4A47Q6IF82 309 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 LINC00114Q6XXX2 140 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 CLDND2Q8NHS1 167 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 KBTBD11-OT1A0A1B0GTJ5 212 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 UMODP07911 640 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 OR10S1Q8NGN2 331 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 HIST1H4GQ99525 98 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 REPIN1Q9BWE0 567 aaKnown RBP10.82□□□□□ -0.68
SCN8A-209ENST00000627620 IGKV3OR2-268A0A0C4DH90 116 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 CA7P43166 264 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.82□□□□□ -0.68
SCN8A-209ENST00000627620 TCF21O43680 179 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 KIR2DL4Q99706 377 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 WDYHV1Q96HA8 205 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 RPRMQ9NS64 109 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 FBXL7Q9UJT9 491 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 PARP14Q460N5 1801 aa10.82□□□□□ -0.68
SCN8A-209ENST00000627620 NRXN2Q9P2S2 1712 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 CELA3BP08861 270 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 TMEM70Q9BUB7 260 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 FOXA2Q9Y261 457 aaPredicted RBP10.81□□□□□ -0.68
SCN8A-209ENST00000627620 TRBV20OR9-2A0A075B6H5 130 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 GRIFINA4D1Z8 144 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 C9orf106Q8NAJ2 232 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 HIST1H2BAQ96A08 127 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 C7orf71A4D174 169 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 RCC1LQ96I51 464 aaKnown RBP10.81□□□□□ -0.68
SCN8A-209ENST00000627620 FABP2P12104 132 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 COTL1Q14019 142 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 C12orf54Q6X4T0 127 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 OR4D5Q8NGN0 318 aa10.81□□□□□ -0.68
SCN8A-209ENST00000627620 TRBV9A0A0B4J1U6 114 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 C9JCJ5 164 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 EFEMP2O95967 443 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 HLA-DRB1P01911 266 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 NBEAP1P0C6P0 100 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 IGFBP2P18065 325 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 A0A0G2JK05 382 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 IFITM2Q01629 132 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 RTN4RL2Q86UN3 420 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 MRPS18CQ9Y3D5 142 aaKnown RBP10.8□□□□□ -0.68
SCN8A-209ENST00000627620 PTPRFP10586 1907 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 UCP1P25874 307 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 CIRBPQ14011 172 aaKnown RBP10.8□□□□□ -0.68
SCN8A-209ENST00000627620 SLC25A34Q6PIV7 304 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 FAM168AQ92567 244 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 UQCR10Q9UDW1 63 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 SCN10AQ9Y5Y9 1956 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 TMEM250H0YL14 139 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 CEACAM4O75871 244 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 HBBP68871 147 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 MEF2CQ06413 473 aaPredicted RBP10.8□□□□□ -0.68
SCN8A-209ENST00000627620 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 ZNF506Q5JVG8 444 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 PPP1R27Q86WC6 154 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 GGACTQ9BVM4 153 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 MRPL20Q9BYC9 149 aaKnown RBP10.8□□□□□ -0.68
SCN8A-209ENST00000627620 PLSCR2Q9NRY7 297 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 CACNA1IQ9P0X4 2223 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 SPTBP11277 2137 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 IQCF6A8MYZ5 107 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 CGAP01215 116 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 TAS2R60P59551 318 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 TFF3Q07654 80 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 TMEM105Q8N8V8 129 aa10.8□□□□□ -0.68
SCN8A-209ENST00000627620 WFIKKN1Q96NZ8 548 aa10.79□□□□□ -0.68
SCN8A-209ENST00000627620 SDHCQ99643 169 aaPredicted RBP10.79□□□□□ -0.68
SCN8A-209ENST00000627620 RTBDNQ9BSG5 229 aaPredicted RBP10.79□□□□□ -0.68
SCN8A-209ENST00000627620 GEMIN7Q9H840 131 aaKnown RBP10.79□□□□□ -0.68
SCN8A-209ENST00000627620 ZNF318Q5VUA4 2279 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms