RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 OR4F17Q8NGA8 305 aa15.84■□□□□ 0.13
PTCD3-220ENST00000627371 TMEM230Q96A57 120 aa15.84■□□□□ 0.13
PTCD3-220ENST00000627371 OR4F4Q96R69 305 aa15.84■□□□□ 0.13
PTCD3-220ENST00000627371 KLK15Q9H2R5 256 aa15.84■□□□□ 0.13
PTCD3-220ENST00000627371 CENPXA8MT69 81 aa15.83■□□□□ 0.12
PTCD3-220ENST00000627371 CD40LGP29965 261 aa15.83■□□□□ 0.12
PTCD3-220ENST00000627371 SLC6A1P30531 599 aa15.83■□□□□ 0.12
PTCD3-220ENST00000627371 RAB9AP51151 201 aa15.83■□□□□ 0.12
PTCD3-220ENST00000627371 RBMS2Q15434 407 aaKnown RBP15.83■□□□□ 0.12
PTCD3-220ENST00000627371 TRIM16LQ309B1 348 aa15.83■□□□□ 0.12
PTCD3-220ENST00000627371 SGPP2Q8IWX5 399 aa15.83■□□□□ 0.12
PTCD3-220ENST00000627371 WDR12Q9GZL7 423 aaKnown RBP15.83■□□□□ 0.12
PTCD3-220ENST00000627371 TMEM222Q9H0R3 208 aa15.83■□□□□ 0.12
PTCD3-220ENST00000627371 LINC00854A0A1B0GVQ3 168 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 TEX22C9J3V5 150 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 E7EUB6 86 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 H3BUA1 57 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 OR9G9P0C7N8 305 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 APELAP0DMC3 54 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 MYOD1P15172 320 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 CDX1P47902 265 aaPredicted RBP15.82■□□□□ 0.12
PTCD3-220ENST00000627371 KIAA0141Q14154 515 aaPredicted RBP15.82■□□□□ 0.12
PTCD3-220ENST00000627371 TREML4Q6UXN2 200 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 C18orf65Q6ZTR6 163 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 KLHL30-AS1Q8NEE0 82 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 OR5T1Q8NG75 326 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 FAM110DQ8TAY7 271 aaPredicted RBP15.82■□□□□ 0.12
PTCD3-220ENST00000627371 GLYATL2Q8WU03 294 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 GALNT14Q96FL9 552 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 TSC22D3Q99576 134 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 COMMD5Q9GZQ3 224 aa15.82■□□□□ 0.12
PTCD3-220ENST00000627371 A0A1B0GW64 132 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 NUDT19A8MXV4 375 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 SNAPC5O75971 98 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 ATG12O94817 140 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 CCR6P51684 374 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 OR2B8PP59922 312 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 DHODHQ02127 395 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 H2BFWTQ7Z2G1 175 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 ZNF695Q8IW36 515 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 ZNF491Q8N8L2 437 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 CASTOR1Q8WTX7 329 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 UBE2E2Q96LR5 201 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 FYTTD1Q96QD9 318 aaKnown RBP15.81■□□□□ 0.12
PTCD3-220ENST00000627371 SLA2Q9H6Q3 261 aa15.81■□□□□ 0.12
PTCD3-220ENST00000627371 HMX3A6NHT5 357 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 CGB1A6NKQ9 187 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 BRI3O95415 125 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 CDS2O95674 445 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 IGKV1-5P01602 117 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 AKR1C4P17516 323 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 BTCP35070 178 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 ZNF846Q147U1 533 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 C8orf86Q6ZUL3 223 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 TMED4Q7Z7H5 227 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 PRNDQ9UKY0 176 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 KCNIP3Q9Y2W7 256 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 NSG2Q9Y328 171 aa15.8■□□□□ 0.12
PTCD3-220ENST00000627371 C15orf61A6NNL5 157 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 PLA2G10O15496 165 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 NDUFB6O95139 128 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 P0C879 139 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 AKR1C2P52895 323 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 TPPP2P59282 170 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 SUPT4H1P63272 117 aaKnown RBP15.79■□□□□ 0.12
PTCD3-220ENST00000627371 SLC25A42Q86VD7 318 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 TTC9CQ8N5M4 171 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 LHFPL5Q8TAF8 219 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 C4orf3Q8WVX3 66 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 MS4A10Q96PG2 267 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 ZNF355PQ9NSJ1 428 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 TMEM14BQ9NUH8 114 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 COA4Q9NYJ1 87 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 FKBP11Q9NYL4 201 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 MGAM2Q2M2H8 2515 aa15.79■□□□□ 0.12
PTCD3-220ENST00000627371 NPIPB5A8MRT5 1133 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 LYRM1O43325 122 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 TRGV3P03979 118 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 TMEM187Q14656 261 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 TMEM128Q5BJH2 165 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 THOC7Q6I9Y2 204 aaKnown RBP15.78■□□□□ 0.12
PTCD3-220ENST00000627371 OR1L8Q8NGR8 309 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 RBPMSQ93062 196 aaKnown RBP15.78■□□□□ 0.12
PTCD3-220ENST00000627371 TMEM56Q96MV1 263 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 SRSF8Q9BRL6 282 aaKnown RBP15.78■□□□□ 0.12
PTCD3-220ENST00000627371 QTRT1Q9BXR0 403 aaKnown RBP15.78■□□□□ 0.12
PTCD3-220ENST00000627371 GNB4Q9HAV0 340 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 ZNF257Q9Y2Q1 563 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 OR51B2Q9Y5P1 312 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 TMEM56-RWDD3S4R434 201 aa15.78■□□□□ 0.12
PTCD3-220ENST00000627371 TEX50A0A1B0GTY4 177 aa15.77■□□□□ 0.12
PTCD3-220ENST00000627371 DBX1A6NMT0 343 aa15.77■□□□□ 0.12
PTCD3-220ENST00000627371 ANXA3P12429 323 aa15.77■□□□□ 0.12
PTCD3-220ENST00000627371 ETV3LQ6ZN32 361 aa15.77■□□□□ 0.12
PTCD3-220ENST00000627371 SELENOHQ8IZQ5 122 aaKnown RBP15.77■□□□□ 0.12
PTCD3-220ENST00000627371 CENPSQ8N2Z9 138 aa15.77■□□□□ 0.12
PTCD3-220ENST00000627371 OR5B3Q8NH48 314 aa15.77■□□□□ 0.12
PTCD3-220ENST00000627371 OR4A16Q8NH70 328 aa15.77■□□□□ 0.12
PTCD3-220ENST00000627371 IL22RA2Q969J5 263 aa15.77■□□□□ 0.12
PTCD3-220ENST00000627371 RRNAD1Q96FB5 475 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms