RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 RFPL3SP0C7P2 107 aa14.93□□□□□ -0.02
FARP1-242ENST00000627049 FOXA3P55318 350 aaPredicted RBP14.93□□□□□ -0.02
FARP1-242ENST00000627049 RPL11P62913 178 aaKnown RBP14.93□□□□□ -0.02
FARP1-242ENST00000627049 WDR31Q8NA23 367 aa14.93□□□□□ -0.02
FARP1-242ENST00000627049 ST6GALNAC3Q8NDV1 305 aa14.93□□□□□ -0.02
FARP1-242ENST00000627049 NABP1Q96AH0 204 aa14.93□□□□□ -0.02
FARP1-242ENST00000627049 CALYQ9NYX4 217 aa14.93□□□□□ -0.02
FARP1-242ENST00000627049 BHLHA15Q7RTS1 189 aaPredicted RBP14.93□□□□□ -0.02
FARP1-242ENST00000627049 NIT1Q86X76 327 aa14.93□□□□□ -0.02
FARP1-242ENST00000627049 MRPL32Q9BYC8 188 aaKnown RBP14.93□□□□□ -0.02
FARP1-242ENST00000627049 TANC1Q9C0D5 1861 aa14.93□□□□□ -0.02
FARP1-242ENST00000627049 SPEM2Q0P670 501 aa14.93□□□□□ -0.02
FARP1-242ENST00000627049 PLPPR1Q8TBJ4 325 aa14.93□□□□□ -0.02
FARP1-242ENST00000627049 RNASEH2CQ8TDP1 164 aaKnown RBP14.93□□□□□ -0.02
FARP1-242ENST00000627049 TCF20Q9UGU0 1960 aaKnown RBP14.93□□□□□ -0.02
FARP1-242ENST00000627049 ZNF324O75467 553 aaPredicted RBP14.92□□□□□ -0.02
FARP1-242ENST00000627049 COMPP49747 757 aaPredicted RBP14.92□□□□□ -0.02
FARP1-242ENST00000627049 ZNF146Q15072 292 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 KLF14Q8TD94 323 aaPredicted RBP14.92□□□□□ -0.02
FARP1-242ENST00000627049 TIMD4Q96H15 378 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 TMEM208Q9BTX3 173 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 LIPFP07098 398 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 HBBP68871 147 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 TMSB15BA0A087X1C1 80 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 TRAV24A0A0B4J272 114 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 RPL8P62917 257 aaKnown RBP14.92□□□□□ -0.02
FARP1-242ENST00000627049 GRAMD2BQ96HH9 432 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 ZNF581Q9P0T4 197 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 HSPB7Q9UBY9 170 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 REG1BP48304 166 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 RAB37Q96AX2 223 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 SMIM12Q96EX1 92 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 EAF1Q96JC9 268 aaPredicted RBP14.92□□□□□ -0.02
FARP1-242ENST00000627049 SGK494Q96LW2 274 aa14.92□□□□□ -0.02
FARP1-242ENST00000627049 PHF3Q92576 2039 aaKnown RBP14.92□□□□□ -0.02
FARP1-242ENST00000627049 IGFBP2P18065 325 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 PRRX1P54821 245 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 ST6GALNAC6Q969X2 333 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 HIGD1AQ9Y241 93 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 WDR83OSQ9Y284 106 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 S100A4P26447 101 aaKnown RBP14.91□□□□□ -0.02
FARP1-242ENST00000627049 IL15RAQ13261 267 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 AKIRIN1Q9H9L7 192 aaPredicted RBP14.91□□□□□ -0.02
FARP1-242ENST00000627049 J3QW42 95 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 WNT9BO14905 357 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 TDGF1P3P51864 188 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 GNB2P62879 340 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 PMCHL2Q9BQD1 86 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 GNB1LQ9BYB4 327 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 WIPF3A6NGB9 483 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 IGLV3-19P01714 112 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 TIMP3P35625 211 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 DEFB109BQ30KR1 87 aa14.91□□□□□ -0.02
FARP1-242ENST00000627049 RNASE7Q9H1E1 156 aaKnown RBP14.91□□□□□ -0.02
FARP1-242ENST00000627049 C21orf140B9A014 251 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 GDF9O60383 454 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 RAMP3O60896 148 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 TBR1Q16650 682 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 GCSAMLQ5JQS6 135 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 FAM222BQ8WU58 562 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 LYRM7Q5U5X0 104 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 OR10AG1Q8NH19 301 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 ASXL3Q9C0F0 2248 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 ESPL1Q14674 2120 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 SCN5AQ14524 2016 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 IGHV3-21A0A0B4J1V1 117 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 IZUMO1RA6ND01 250 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 MNX1P50219 401 aaPredicted RBP14.9□□□□□ -0.02
FARP1-242ENST00000627049 ATP5IP56385 69 aaPredicted RBP14.9□□□□□ -0.02
FARP1-242ENST00000627049 CHODLQ9H9P2 273 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 PFN1P07737 140 aaKnown RBP14.9□□□□□ -0.02
FARP1-242ENST00000627049 APELAP0DMC3 54 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 SAPCD1Q5SSQ6 148 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 C1orf174Q8IYL3 243 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 LYPD6BQ8NI32 183 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 LEAP2Q969E1 77 aa14.9□□□□□ -0.02
FARP1-242ENST00000627049 ACSF3Q4G176 576 aaPredicted RBP14.89□□□□□ -0.03
FARP1-242ENST00000627049 RPL39P5Q59GN2 51 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 TNFRSF19Q9NS68 423 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 MIR17HGQ75NE6 70 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 ZIC4Q8N9L1 334 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 SNRNP40Q96DI7 357 aaKnown RBP14.89□□□□□ -0.03
FARP1-242ENST00000627049 FNDC1Q4ZHG4 1894 aaPredicted RBP14.89□□□□□ -0.03
FARP1-242ENST00000627049 TRAV9-2A0A087WT02 112 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 ORM1P02763 201 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 CLDN18P56856 261 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 FBLN7Q53RD9 439 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 MRPL52Q86TS9 123 aaKnown RBP14.89□□□□□ -0.03
FARP1-242ENST00000627049 SEMA5BQ9P283 1151 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 FOXC1Q12948 553 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 OR10J3Q5JRS4 329 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 FAM214BQ7L5A3 538 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 DNASE2BQ8WZ79 361 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 SNHG12Q9BXW3 62 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 OSTCQ9NRP0 149 aa14.89□□□□□ -0.03
FARP1-242ENST00000627049 OR2T8A6NH00 312 aa14.88□□□□□ -0.03
FARP1-242ENST00000627049 IGKV1-5P01602 117 aa14.88□□□□□ -0.03
FARP1-242ENST00000627049 TMEM108Q6UXF1 575 aa14.88□□□□□ -0.03
FARP1-242ENST00000627049 ARL6IP6Q8N6S5 226 aa14.88□□□□□ -0.03
FARP1-242ENST00000627049 GUCD1Q96NT3 240 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms