RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 SRSF12Q8WXF0 261 aaKnown RBP13.72□□□□□ -0.21
SLC6A6-209ENST00000622176 FAM103A1Q9BTL3 118 aaKnown RBP13.72□□□□□ -0.21
SLC6A6-209ENST00000622176 PRR13Q9NZ81 148 aa13.72□□□□□ -0.21
SLC6A6-209ENST00000622176 TRAV6A0A075B6T7 132 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 PIGBOS1A0A0B4J2F0 54 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 C9orf170A2RU37 121 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 SNAPC5O75971 98 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 H2AFB2P0C5Z0 115 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 PPIFP30405 207 aaKnown RBP13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 AKR1C2P52895 323 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 SLC35B1P78383 322 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 TMEM267Q0VDI3 215 aaPredicted RBP13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 C10orf55Q5SWW7 151 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 ZNF329Q86UD4 541 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 FAM219AQ8IW50 185 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 LRTM2Q8N967 370 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 MINDY2Q8NBR6 621 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 OR5AU1Q8NGC0 362 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 RRNAD1Q96FB5 475 aaKnown RBP13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 PRNDQ9UKY0 176 aa13.71□□□□□ -0.21
SLC6A6-209ENST00000622176 A0A0B4J2A0 478 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 MSGN1A6NI15 193 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 MYOD1P15172 320 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 RPL27AP46776 148 aaKnown RBP13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 DHRS2Q13268 280 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 ECSCRQ19T08 205 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 C10orf99Q6UWK7 81 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 LYG2Q86SG7 212 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 COMMD1Q8N668 190 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 LFNGQ8NES3 379 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 LSM10Q969L4 123 aaKnown RBP13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 TMEM68Q96MH6 324 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 SPIN2AQ99865 258 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 CITED1Q99966 193 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 SPIN2BQ9BPZ2 258 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 TMEM14BQ9NUH8 114 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 FKBP11Q9NYL4 201 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 SHPKQ9UHJ6 478 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 NSG2Q9Y328 171 aa13.7□□□□□ -0.22
SLC6A6-209ENST00000622176 A0A0B4J293 547 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 A0A0G2JRQ6 117 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 A0A1B0GW64 132 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 C15orf61A6NNL5 157 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 E7EUB6 86 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 IGHG4P01861 327 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 HLA-AP01891 365 aaKnown RBP13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 OR2B8PP59922 312 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 SRSF4Q08170 494 aaKnown RBP13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 IZUMO4Q1ZYL8 232 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 C4orf46Q504U0 113 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 ASPHD1Q5U4P2 390 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 UNQ5815/PRO19632Q6UWF5 114 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 SLC35G3Q8N808 338 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 OR4A16Q8NH70 328 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 CASTOR1Q8WTX7 329 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 COMMD5Q9GZQ3 224 aa13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 FOXA2Q9Y261 457 aaPredicted RBP13.69□□□□□ -0.22
SLC6A6-209ENST00000622176 TEX50A0A1B0GTY4 177 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 DUXBA0A1W2PPF3 345 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 CGB1A6NKQ9 187 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 DBX1A6NMT0 343 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 TEX22C9J3V5 150 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 FBXO24O75426 580 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 DUS4LO95620 317 aaKnown RBP13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 OPN1MWP04001 364 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 OPN1MW2P0DN77 364 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 OPN1MW3P0DN78 364 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 RAB25P57735 213 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 FOXE3Q13461 319 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 DCTN2Q13561 401 aaKnown RBP13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 NMSQ5H8A3 153 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 TCTEX1D4Q5JR98 221 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 TEX38Q6PEX7 206 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 SHISA2Q6UWI4 295 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 LYZL2Q7Z4W2 148 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 ZNF429Q86V71 674 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 RNF152Q8N8N0 203 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 OR4X2Q8NGF9 303 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 OR1L8Q8NGR8 309 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 RNASE11Q8TAA1 199 aaKnown RBP13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 GPR146Q96CH1 333 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 PHB2Q99623 299 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 ZNF257Q9Y2Q1 563 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 OR51B2Q9Y5P1 312 aa13.68□□□□□ -0.22
SLC6A6-209ENST00000622176 SOX15O60248 233 aa13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 ELANEP08246 267 aa13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 CD28P10747 220 aa13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 CD83Q01151 205 aa13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 THOC7Q6I9Y2 204 aaKnown RBP13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 PLET1Q6UQ28 207 aa13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 Q6ZRM9 215 aa13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 OR5M8Q8NGP6 311 aa13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 OR5B3Q8NH48 314 aa13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 MITD1Q8WV92 249 aa13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 FYTTD1Q96QD9 318 aaKnown RBP13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 SRSF8Q9BRL6 282 aaKnown RBP13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 MARVELD1Q9BSK0 173 aa13.67□□□□□ -0.22
SLC6A6-209ENST00000622176 QTRT1Q9BXR0 403 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms