RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 PPIAL4AQ9Y536 164 aa13.05□□□□□ -0.32
NPHP4-211ENST00000622020 TMPRSS2O15393 492 aa13.05□□□□□ -0.32
NPHP4-211ENST00000622020 KRTDAPP60985 99 aa13.05□□□□□ -0.32
NPHP4-211ENST00000622020 VWA1Q6PCB0 445 aa13.05□□□□□ -0.32
NPHP4-211ENST00000622020 RNASE7Q9H1E1 156 aaKnown RBP13.05□□□□□ -0.32
NPHP4-211ENST00000622020 GCM1Q9NP62 436 aa13.05□□□□□ -0.32
NPHP4-211ENST00000622020 RNF114Q9Y508 228 aa13.05□□□□□ -0.32
NPHP4-211ENST00000622020 INTS1Q8N201 2190 aaKnown RBP13.04□□□□□ -0.32
NPHP4-211ENST00000622020 CNOT1A5YKK6 2376 aaKnown RBP13.04□□□□□ -0.32
NPHP4-211ENST00000622020 GFRA3O60609 400 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 IL6RP08887 468 aaPredicted RBP13.04□□□□□ -0.32
NPHP4-211ENST00000622020 STAG3L2P0CL84 134 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 STAG3L3P0CL85 134 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 SPRNQ5BIV9 151 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 VHLLQ6RSH7 139 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 TMEM140Q9NV12 185 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 KLF13Q9Y2Y9 288 aaPredicted RBP13.04□□□□□ -0.32
NPHP4-211ENST00000622020 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.04□□□□□ -0.32
NPHP4-211ENST00000622020 DLEU1O43261 78 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 CXorf1O96002 111 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 OR10J4P0C629 311 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 PRDX2P32119 198 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 TFPI2P48307 235 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 ERVK-16P61578 105 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 EFNB3Q15768 340 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 ARSJQ5FYB0 599 aaPredicted RBP13.04□□□□□ -0.32
NPHP4-211ENST00000622020 TMEM164Q5U3C3 297 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 DHRS13Q6UX07 377 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 STPG3Q8N7X2 389 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 NHLRC2Q8NBF2 726 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 HES4Q9HCC6 221 aa13.04□□□□□ -0.32
NPHP4-211ENST00000622020 GVINP1Q7Z2Y8 2422 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 YLPM1P49750 1951 aaKnown RBP13.03□□□□□ -0.32
NPHP4-211ENST00000622020 IGFBP2P18065 325 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 RAB4AP20338 218 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 GCHFRP30047 84 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 HOXC12P31275 282 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 MIR17HGQ75NE6 70 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 C1orf159Q96HA4 380 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 ABCA1O95477 2261 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 MGAQ8IWI9 3026 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 CD46P15529 392 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 CRYBB3P26998 211 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 MLANAQ16655 118 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 S1PR3Q99500 378 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 LRFN3Q9BTN0 628 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 PLCE1Q9P212 2302 aa13.03□□□□□ -0.32
NPHP4-211ENST00000622020 ACP1P24666 158 aa13.02□□□□□ -0.32
NPHP4-211ENST00000622020 OPRK1P41145 380 aa13.02□□□□□ -0.32
NPHP4-211ENST00000622020 MORN2Q502X0 79 aa13.02□□□□□ -0.32
NPHP4-211ENST00000622020 DIRC2Q96SL1 478 aa13.02□□□□□ -0.32
NPHP4-211ENST00000622020 CXXC4Q9H2H0 198 aa13.02□□□□□ -0.32
NPHP4-211ENST00000622020 TCF19Q9Y242 345 aa13.02□□□□□ -0.32
NPHP4-211ENST00000622020 C15orf65H3BRN8 121 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 CA1P00915 261 aaPredicted RBP13.02□□□□□ -0.33
NPHP4-211ENST00000622020 HTD2P86397 168 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 PSG5Q15238 335 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 GABRA6Q16445 453 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 SMIM21Q3B7S5 101 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 ST6GALNAC3Q8NDV1 305 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 SERTAD4Q9NUC0 356 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 ZNRD1Q9P1U0 126 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 PCNX2A6NKB5 2137 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 PMCHP20382 165 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 TPPP2P59282 170 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 RELBQ01201 579 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 DMRTA1Q5VZB9 504 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 MRPL54Q6P161 138 aaKnown RBP13.02□□□□□ -0.33
NPHP4-211ENST00000622020 PQLC2Q6ZP29 291 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 MMD2Q8IY49 270 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 DEFB108BQ8NET1 73 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 NAT8BQ9UHF3 227 aa13.02□□□□□ -0.33
NPHP4-211ENST00000622020 TMEM210A6NLX4 147 aa13.01□□□□□ -0.33
NPHP4-211ENST00000622020 CD99P14209 185 aa13.01□□□□□ -0.33
NPHP4-211ENST00000622020 GNG10P50151 68 aa13.01□□□□□ -0.33
NPHP4-211ENST00000622020 OR5AU1Q8NGC0 362 aa13.01□□□□□ -0.33
NPHP4-211ENST00000622020 SPRY4Q9C004 299 aa13.01□□□□□ -0.33
NPHP4-211ENST00000622020 PPP1R14DQ9NXH3 145 aa13.01□□□□□ -0.33
NPHP4-211ENST00000622020 RPLP1P05386 114 aaKnown RBP13.01□□□□□ -0.33
NPHP4-211ENST00000622020 CECR9P0C854 216 aa13.01□□□□□ -0.33
NPHP4-211ENST00000622020 MGST1P10620 155 aaKnown RBP13.01□□□□□ -0.33
NPHP4-211ENST00000622020 VDAC2P45880 294 aaPredicted RBP13.01□□□□□ -0.33
NPHP4-211ENST00000622020 DUX4L9Q6RFH8 374 aaPredicted RBP13.01□□□□□ -0.33
NPHP4-211ENST00000622020 NPVFQ9HCQ7 196 aa13.01□□□□□ -0.33
NPHP4-211ENST00000622020 KIR2DL5BA0A0G2JN68 375 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 KIR2DL5BA0A0G2JPC4 375 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 TNFSF15O95150 251 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 CA2P00918 260 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 TPTE2P1Q5T6R2 138 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 KIR2DL5AQ8N109 375 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 MDS2Q8NDY4 140 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 OPN3Q9H1Y3 402 aaPredicted RBP13□□□□□ -0.33
NPHP4-211ENST00000622020 IL36BQ9NZH7 164 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 CBY1Q9Y3M2 126 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 TPRP12270 2363 aaKnown RBP13□□□□□ -0.33
NPHP4-211ENST00000622020 TECTAO75443 2155 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 IGKV1D-17A0A075B6S4 117 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 OR7C2O60412 319 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 TNFSF10P50591 281 aa13□□□□□ -0.33
NPHP4-211ENST00000622020 ZNF718Q3SXZ3 478 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms