RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 GLRXP35754 106 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 SPCS3P61009 180 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 NKX6-1P78426 367 aaPredicted RBP14.36□□□□□ -0.11
FAM3A-222ENST00000621967 LTC4SQ16873 150 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 TMEM249Q2WGJ8 235 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 BSXQ3C1V8 233 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 LRP11Q86VZ4 500 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 OR52E5Q8NH55 327 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 GATAD1Q8WUU5 269 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 IFI27L2Q9H2X8 130 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 DUSP13Q9UII6 198 aa14.36□□□□□ -0.11
FAM3A-222ENST00000621967 FASNP49327 2511 aaKnown RBP14.36□□□□□ -0.11
FAM3A-222ENST00000621967 ICE1Q9Y2F5 2266 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 A6NNC1 897 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 SHISA9B4DS77 424 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 IGHV2-70P01814 119 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 ACOT6Q3I5F7 207 aaPredicted RBP14.35□□□□□ -0.11
FAM3A-222ENST00000621967 C16orf82Q7Z2V1 217 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 HIST3H2BBQ8N257 126 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 RAB1CQ92928 201 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 RPUSD4Q96CM3 377 aaKnown RBP14.35□□□□□ -0.11
FAM3A-222ENST00000621967 NCOR1P1Q9H4R4 102 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 PLCE1Q9P212 2302 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 PKDREJQ9NTG1 2253 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 CD1BP29016 333 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 S100A2P29034 98 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 CDC34P49427 236 aaPredicted RBP14.35□□□□□ -0.11
FAM3A-222ENST00000621967 PYY3Q5JQD4 70 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 PRAMEF5Q5TYX0 476 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 OR4F5Q8NH21 305 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 OR4F4Q96R69 305 aa14.35□□□□□ -0.11
FAM3A-222ENST00000621967 DOPEY2Q9Y3R5 2298 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 SMCO3A2RU48 225 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 PRSS46E5RG02 174 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 M0R1X1 148 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 ITGB1BP1O14713 200 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 MPDU1O75352 247 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 PLAUP00749 431 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 LHBP01229 141 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 SOD3P08294 240 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 CGB3P0DN86 165 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 CGB7P0DN87 165 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 LOXP28300 417 aaPredicted RBP14.34□□□□□ -0.11
FAM3A-222ENST00000621967 VDAC2P45880 294 aaPredicted RBP14.34□□□□□ -0.11
FAM3A-222ENST00000621967 ZNF134P52741 427 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 SPRNQ5BIV9 151 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 DDB2Q92466 427 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 NEIL1Q96FI4 390 aaPredicted RBP14.34□□□□□ -0.11
FAM3A-222ENST00000621967 MEGF10Q96KG7 1140 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 OR2V2Q96R30 315 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 TMEM204Q9BSN7 226 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 GAB2Q9UQC2 676 aa14.34□□□□□ -0.11
FAM3A-222ENST00000621967 VSTM5A8MXK1 200 aa14.33□□□□□ -0.11
FAM3A-222ENST00000621967 PPP1R2P9O14990 202 aa14.33□□□□□ -0.11
FAM3A-222ENST00000621967 PAGE4O60829 102 aa14.33□□□□□ -0.11
FAM3A-222ENST00000621967 GOSR1O95249 250 aa14.33□□□□□ -0.11
FAM3A-222ENST00000621967 RPP30P78346 268 aaKnown RBP14.33□□□□□ -0.11
FAM3A-222ENST00000621967 RELBQ01201 579 aa14.33□□□□□ -0.11
FAM3A-222ENST00000621967 RPL39P5Q59GN2 51 aa14.33□□□□□ -0.11
FAM3A-222ENST00000621967 OR10A7Q8NGE5 316 aa14.33□□□□□ -0.11
FAM3A-222ENST00000621967 SRD5A3Q9H8P0 318 aa14.33□□□□□ -0.11
FAM3A-222ENST00000621967 ABCA4P78363 2273 aa14.33□□□□□ -0.12
FAM3A-222ENST00000621967 IGHV3OR15-7A0A075B7D8 119 aa14.33□□□□□ -0.12
FAM3A-222ENST00000621967 VENTXO95231 258 aa14.33□□□□□ -0.12
FAM3A-222ENST00000621967 KIR2DS2P43631 304 aa14.33□□□□□ -0.12
FAM3A-222ENST00000621967 KLF3P57682 345 aaPredicted RBP14.33□□□□□ -0.12
FAM3A-222ENST00000621967 TGIF2LYQ8IUE0 185 aa14.33□□□□□ -0.12
FAM3A-222ENST00000621967 ZNRF1Q8ND25 227 aa14.33□□□□□ -0.12
FAM3A-222ENST00000621967 OR51G1Q8NGK1 321 aa14.33□□□□□ -0.12
FAM3A-222ENST00000621967 OR4A16Q8NH70 328 aa14.33□□□□□ -0.12
FAM3A-222ENST00000621967 NEUROG1Q92886 237 aa14.33□□□□□ -0.12
FAM3A-222ENST00000621967 ROS1P08922 2347 aa14.33□□□□□ -0.12
FAM3A-222ENST00000621967 IGLV3-9A0A075B6K5 115 aa14.32□□□□□ -0.12
FAM3A-222ENST00000621967 DEFA4P12838 97 aa14.32□□□□□ -0.12
FAM3A-222ENST00000621967 SELENOVP59797 346 aa14.32□□□□□ -0.12
FAM3A-222ENST00000621967 ERVK-16P61578 105 aa14.32□□□□□ -0.12
FAM3A-222ENST00000621967 ZNF672Q499Z4 452 aaPredicted RBP14.32□□□□□ -0.12
FAM3A-222ENST00000621967 GFI1BQ5VTD9 330 aa14.32□□□□□ -0.12
FAM3A-222ENST00000621967 MOGAT3Q86VF5 341 aa14.32□□□□□ -0.12
FAM3A-222ENST00000621967 PSMG3-AS1Q96PY0 264 aa14.32□□□□□ -0.12
FAM3A-222ENST00000621967 CALYQ9NYX4 217 aa14.32□□□□□ -0.12
FAM3A-222ENST00000621967 E7EQL1 145 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 OPRK1P41145 380 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 TREML4Q6UXN2 200 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 SSX9Q7RTT3 188 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 ANAPC16Q96DE5 110 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 S1PR3Q99500 378 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 GPR61Q9BZJ8 451 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 H7BYZ3 331 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 OR4A8P0C604 315 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 NPPCP23582 126 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 COL8A1P27658 744 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 GATA4P43694 442 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 RAB7AP51149 207 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 C17orf58Q2M2W7 97 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 TMEM170AQ8WVE7 144 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 TMEM140Q9NV12 185 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 DMRT1Q9Y5R6 373 aa14.31□□□□□ -0.12
FAM3A-222ENST00000621967 C11orf94C9JXX5 98 aa14.3□□□□□ -0.12
FAM3A-222ENST00000621967 RRHO14718 337 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms