RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 OR5W2Q8NH69 310 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 SCGB1C1Q8TD33 95 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 TWIST2Q8WVJ9 160 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 KLK6Q92876 244 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 MS4A6EQ96DS6 147 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 IGF2BP2-AS1Q96M15 143 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 C18orf15Q96N68 181 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 IP6K3Q96PC2 410 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 NMNAT3Q96T66 252 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 NRIP2Q9BQI9 281 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 ANAPC13Q9BS18 74 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 NDFIP1Q9BT67 221 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 OR2H1Q9GZK4 316 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 GTSF1LQ9H1H1 148 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 OR2D2Q9H210 308 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 NAT8BQ9UHF3 227 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 MCTS1Q9ULC4 181 aaKnown RBP2.4□□□□□ -2.03
BRCA1-229ENST00000621897 HIGD1AQ9Y241 93 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 HS3ST2Q9Y278 367 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 LAMTOR2Q9Y2Q5 125 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 MED31Q9Y3C7 131 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 ARAP3Q8WWN8 1544 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 MYH11P35749 1972 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 PHLPP1O60346 1717 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 IGLV4-69A0A075B6H9 119 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 A0A1B0GVG6 124 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 CIB4A0PJX0 185 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 F6UZH7 168 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 M0R381 172 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 LGALS9O00182 355 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 DEDDO75618 318 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 FSTL3O95633 263 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 OR2H2O95918 312 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 NRASP01111 189 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 IGLV2-8P01709 118 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 P0DMU3 169 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 FAM231AP0DMU4 169 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 FAM231CP0DMU5 169 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 SMIM10L2AP0DMW4 78 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 SMIM10L2BP0DMW5 78 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 MUC1P15941 1255 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF823P16415 610 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF30P17039 623 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 IMPA1P29218 277 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 S100A11P31949 105 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 GABRA3P34903 492 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 LPAR6P43657 344 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 MAXP61244 160 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 HIST1H1AQ02539 215 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-229ENST00000621897 GNA12Q03113 381 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 DHRS2Q13268 280 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 BIKQ13323 160 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 OR8G1Q15617 311 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 NEDD8Q15843 81 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 Q6Q795 121 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 UNQ9165/PRO28630Q6UXU0 137 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 Q6ZS49 121 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 LINC01551Q86U37 167 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 OR8I2Q8N0Y5 310 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 YIPF7Q8N8F6 280 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 OR4E2Q8NGC2 313 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 OR13C8Q8NGS7 320 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 RTN4IP1Q8WWV3 396 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-229ENST00000621897 TMEM106AQ96A25 262 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 GNPNAT1Q96EK6 184 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-229ENST00000621897 OR2A5Q96R48 311 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 HSD17B10Q99714 261 aaKnown RBP2.39□□□□□ -2.03
BRCA1-229ENST00000621897 RTL8AQ9BWD3 113 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF471Q9BX82 626 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF436Q9C0F3 470 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-229ENST00000621897 OR8D2Q9GZM6 311 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 MED28Q9H204 178 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 PLEKHF2Q9H8W4 249 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 NIT2Q9NQR4 276 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 KCNIP2Q9NS61 270 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 TRAPPC2LQ9UL33 140 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 COQ4Q9Y3A0 265 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 FOCADQ5VW36 1801 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 OVOS2A0A0G2JMS6 1433 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 TECPR2O15040 1411 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 FMN1Q68DA7 1419 aa2.39□□□□□ -2.03
BRCA1-229ENST00000621897 UBR2Q8IWV8 1755 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 TRIP11Q15643 1979 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 UQCRHLA0A096LP55 91 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 IGHV3-74A0A0B4J1X5 117 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 TRAV5A0A0B4J249 113 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 C20orf202A1L168 122 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 FABP5P3A8MUU1 101 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF705GA8MUZ8 300 aaPredicted RBP2.38□□□□□ -2.03
BRCA1-229ENST00000621897 KRBOX1C9JBD0 128 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 C9JQL5 133 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 J3QRK9 145 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 M0R2Z0 102 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 OVOL1O14753 267 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 GSTZ1O43708 216 aaPredicted RBP2.38□□□□□ -2.03
BRCA1-229ENST00000621897 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 IFNA17P01571 189 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 IGLV3-27P01718 113 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 UQCRHP07919 91 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 BCL2P10415 239 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms