RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 P2RY4P51582 365 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 ECSCRQ19T08 205 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 SHISA5Q8N114 240 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 SHANK3Q9BYB0 1731 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 TFPI2P48307 235 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 CEACAM21Q3KPI0 293 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 C1orf100Q5SVJ3 147 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 GCHFRP30047 84 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 NUTF2P61970 127 aaKnown RBP6.16□□□□□ -1.42
COLCA1-205ENST00000620864 ATOH7Q8N100 152 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 TMEM105Q8N8V8 129 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 RPP21Q9H633 154 aaKnown RBP6.16□□□□□ -1.42
COLCA1-205ENST00000620864 TRBV5-5A0A0J9YX44 114 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 TNFSF13O75888 250 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 GPR6P46095 362 aaPredicted RBP6.16□□□□□ -1.42
COLCA1-205ENST00000620864 POU2AF1Q16633 256 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 AMER3Q8N944 861 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 SPINK14Q6IE38 97 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 LILRA6Q6PI73 481 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 TMEM91Q6ZNR0 172 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 DLX4Q92988 240 aaPredicted RBP6.16□□□□□ -1.42
COLCA1-205ENST00000620864 ZNFX1Q9P2E3 1918 aaKnown RBP6.16□□□□□ -1.42
COLCA1-205ENST00000620864 WDR81Q562E7 1941 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 GRIFINA4D1Z8 144 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 DLEU1O43261 78 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 NAPSAO96009 420 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 HBDP02042 147 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 CCL4P13236 92 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 CBLN1P23435 193 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 OTX1P32242 354 aaPredicted RBP6.16□□□□□ -1.42
COLCA1-205ENST00000620864 OR5AN1Q8NGI8 311 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 FOXC2Q99958 501 aa6.16□□□□□ -1.42
COLCA1-205ENST00000620864 SF3B6Q9Y3B4 125 aaKnown RBP6.16□□□□□ -1.42
COLCA1-205ENST00000620864 CRPP02741 224 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 STARD6P59095 220 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 RUNX1Q01196 453 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 GOLT1AQ6ZVE7 132 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 FAM57AQ8TBR7 257 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 DIDO1Q9BTC0 2240 aaKnown RBP6.15□□□□□ -1.42
COLCA1-205ENST00000620864 PSG6Q00889 435 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 C8orf82Q6P1X6 216 aaPredicted RBP6.15□□□□□ -1.42
COLCA1-205ENST00000620864 TNFRSF12AQ9NP84 129 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 SLC25A10Q9UBX3 287 aaPredicted RBP6.15□□□□□ -1.42
COLCA1-205ENST00000620864 ERG28Q9UKR5 140 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 SRSF1Q07955 248 aaKnown RBP eCLIP6.15□□□□□ -1.42
COLCA1-205ENST00000620864 DCAF12L2Q5VW00 463 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 DRAM1Q8N682 238 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 SOSTQ9BQB4 213 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 EDA2RQ9HAV5 297 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 RREB1Q92766 1687 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 IGHV3-13P01766 116 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 IGHV3-7P01780 117 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 CRYBB3P26998 211 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 LINC01465Q8N7H1 131 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 FBLIM1Q8WUP2 373 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 NRN1Q9NPD7 142 aa6.15□□□□□ -1.42
COLCA1-205ENST00000620864 CDC42EP2O14613 210 aa6.15□□□□□ -1.43
COLCA1-205ENST00000620864 ZNF205O95201 554 aa6.15□□□□□ -1.43
COLCA1-205ENST00000620864 CEACAM5P06731 702 aa6.15□□□□□ -1.43
COLCA1-205ENST00000620864 CD200R1LQ6Q8B3 271 aa6.15□□□□□ -1.43
COLCA1-205ENST00000620864 WNT10AQ9GZT5 417 aa6.15□□□□□ -1.43
COLCA1-205ENST00000620864 SP7Q8TDD2 431 aaPredicted RBP6.15□□□□□ -1.43
COLCA1-205ENST00000620864 TNS1Q9HBL0 1735 aaKnown RBP6.15□□□□□ -1.43
COLCA1-205ENST00000620864 NGFRP08138 427 aa6.15□□□□□ -1.43
COLCA1-205ENST00000620864 ZNF688P0C7X2 276 aa6.15□□□□□ -1.43
COLCA1-205ENST00000620864 ZNF362Q5T0B9 420 aaPredicted RBP6.15□□□□□ -1.43
COLCA1-205ENST00000620864 VSTM2LQ96N03 204 aa6.15□□□□□ -1.43
COLCA1-205ENST00000620864 FNDC4Q9H6D8 234 aaPredicted RBP6.15□□□□□ -1.43
COLCA1-205ENST00000620864 JPT1Q9UK76 154 aa6.15□□□□□ -1.43
COLCA1-205ENST00000620864 RBBP6Q7Z6E9 1792 aaKnown RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 NPIPB4C9JG80 1138 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 CEACAM4O75871 244 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 MDKP21741 143 aaPredicted RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 IFI27P40305 119 aaPredicted RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 RPL31P62899 125 aaKnown RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 BMPERQ8N8U9 685 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 EEF1AKMT3Q96AZ1 226 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 NHP2Q9NX24 153 aaKnown RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 M0R2P5 195 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 EDIL3O43854 480 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 GFRA1P56159 465 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 UBE2V1Q13404 147 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 OR52E5Q8NH55 327 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 LHX9Q9NQ69 397 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 AKAP6Q13023 2319 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 C16orf97H3BN30 126 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 CDIPTO14735 213 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 PEX11BO96011 259 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 CELA2BP08218 269 aaPredicted RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 PTGDSP41222 190 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 ZFP36L2P47974 494 aaKnown RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 TMEM258P61165 79 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 COL10A1Q03692 680 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 PDCD1Q15116 288 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 MIC13Q5XKP0 118 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.14□□□□□ -1.43
COLCA1-205ENST00000620864 PEX7O00628 323 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 TGFAP01135 160 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 IFITM2Q01629 132 aa6.14□□□□□ -1.43
COLCA1-205ENST00000620864 PIGYQ3MUY2 71 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms