RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 DMXL2Q8TDJ6 3036 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 SNURFLB1AK76 121 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 RBP4P02753 201 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 UMODP07911 640 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 CSN1S1P47710 185 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 UBE2L3P68036 154 aaKnown RBP5.85□□□□□ -1.47
NEDD9-216ENST00000620854 TMEM183BQ1AE95 376 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 ABLIM2Q6H8Q1 611 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 S100A7AQ86SG5 101 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 DLL3Q9NYJ7 618 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 SMG1Q96Q15 3661 aaKnown RBP5.85□□□□□ -1.47
NEDD9-216ENST00000620854 ZNF503-AS2A6NEH8 195 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 HAND1O96004 215 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 ADMP35318 185 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 TCTAP57738 103 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 ZNF826PQ6ZT77 177 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 ATOH7Q8N100 152 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 DRAM1Q8N682 238 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 OR5A2Q8NGI9 324 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 ZNF596Q8TC21 504 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 FAM122AQ96E09 287 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 DEPPQ9NTK1 212 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 LAMA5O15230 3695 aa5.85□□□□□ -1.47
NEDD9-216ENST00000620854 IGLV3-32A0A0A0MS00 114 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 CTXND1A0A1B0GTU2 59 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 J3QT63 122 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 RBFOX2O43251 390 aaKnown RBP eCLIP5.84□□□□□ -1.47
NEDD9-216ENST00000620854 OR2J3O76001 311 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 BTF3P20290 206 aaKnown RBP5.84□□□□□ -1.47
NEDD9-216ENST00000620854 PTTG1IPP53801 180 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 MRPS11P82912 194 aaKnown RBP5.84□□□□□ -1.47
NEDD9-216ENST00000620854 ACTL10Q5JWF8 245 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 SLC25A40Q8TBP6 338 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 RND1Q92730 232 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 LOC102723996A0A087X1L8 192 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 IGHV3-21A0A0B4J1V1 117 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 CDX4O14627 284 aaPredicted RBP5.84□□□□□ -1.47
NEDD9-216ENST00000620854 RPLP1P05386 114 aaKnown RBP5.84□□□□□ -1.47
NEDD9-216ENST00000620854 ADH4P08319 380 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 OR10J1P30954 320 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 C1orf194Q5T5A4 169 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 HES7Q9BYE0 225 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 DCAF16Q9NXF7 216 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 SLC45A2Q9UMX9 530 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 IGHV3OR15-7A0A075B7D8 119 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 A0A1B0GWJ7 208 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 PLXNB1O43157 2135 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 DLEU1O43261 78 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 KLF7O75840 302 aaPredicted RBP5.84□□□□□ -1.47
NEDD9-216ENST00000620854 SERF1AO75920 110 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 COX7A1P24310 79 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 CCKARP32238 428 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 MMDQ15546 238 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 CEACAM21Q3KPI0 293 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 ERASQ7Z444 233 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 LINC01551Q86U37 167 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 VKORC1L1Q8N0U8 176 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 FDCSPQ8NFU4 85 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 OR52L2PQ8NGH6 319 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 STARD4Q96DR4 205 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 PSMG3Q9BT73 122 aaPredicted RBP5.84□□□□□ -1.47
NEDD9-216ENST00000620854 SCNM1Q9BWG6 230 aa5.84□□□□□ -1.47
NEDD9-216ENST00000620854 ATMQ13315 3056 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 ZNF716A6NP11 495 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 TMPRSS2O15393 492 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 S1PR2O95136 353 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 REG1BP48304 166 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 TMPRSS3P57727 454 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 RPL30P62888 115 aaKnown RBP5.84□□□□□ -1.48
NEDD9-216ENST00000620854 Q6ZWC4 215 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 FA2HQ7L5A8 372 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 TGIF2LYQ8IUE0 185 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 PYGO2Q9BRQ0 406 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 REPIN1Q9BWE0 567 aaKnown RBP5.84□□□□□ -1.48
NEDD9-216ENST00000620854 SH2D2AQ9NP31 389 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 CBY1Q9Y3M2 126 aa5.84□□□□□ -1.48
NEDD9-216ENST00000620854 EXPH5Q8NEV8 1989 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 ODAMA1E959 279 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 TMEM250H0YL14 139 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 SIAH2O43255 324 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 IGLV2-14P01704 120 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 CELA3AP09093 270 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 USF1P22415 310 aaPredicted RBP5.83□□□□□ -1.48
NEDD9-216ENST00000620854 RANP62826 216 aaKnown RBP5.83□□□□□ -1.48
NEDD9-216ENST00000620854 ATP6V1FQ16864 119 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 MDP1Q86V88 176 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 MOGAT3Q86VF5 341 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 OR5AU1Q8NGC0 362 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 OR2D3Q8NGH3 330 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 ANAPC16Q96DE5 110 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 NPCDR1Q9BY65 106 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 WNT10AQ9GZT5 417 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 TIMM9Q9Y5J7 89 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 HTR1DP28221 377 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 ZNF137PP52743 207 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 NHLH1Q02575 133 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 RPEL1Q2QD12 228 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 HLA-DRB5Q30154 266 aa5.83□□□□□ -1.48
NEDD9-216ENST00000620854 ZCCHC14Q8WYQ9 949 aaKnown RBP5.83□□□□□ -1.48
NEDD9-216ENST00000620854 BCL2L2Q92843 193 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms