RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TUBGCP6Q96RT7 1819 aa4.28□□□□□ -1.72
VPS13D-214ENST00000620676 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.28□□□□□ -1.72
VPS13D-214ENST00000620676 LDLRAD1Q5T700 205 aa4.28□□□□□ -1.72
VPS13D-214ENST00000620676 OR52E5Q8NH55 327 aa4.28□□□□□ -1.72
VPS13D-214ENST00000620676 FAM222BQ8WU58 562 aa4.28□□□□□ -1.72
VPS13D-214ENST00000620676 PSMG3Q9BT73 122 aaPredicted RBP4.28□□□□□ -1.72
VPS13D-214ENST00000620676 ALS2Q96Q42 1657 aa4.28□□□□□ -1.72
VPS13D-214ENST00000620676 RGPD5Q99666 1765 aa4.28□□□□□ -1.73
VPS13D-214ENST00000620676 EVPLQ92817 2033 aa4.28□□□□□ -1.73
VPS13D-214ENST00000620676 PLCE1Q9P212 2302 aa4.28□□□□□ -1.73
VPS13D-214ENST00000620676 IGHV3-64A0A075B6Q5 118 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 IZUMO1RA6ND01 250 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 HOXA4Q00056 320 aaPredicted RBP4.27□□□□□ -1.73
VPS13D-214ENST00000620676 ZNF585BQ52M93 769 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 MRAP2Q96G30 205 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 C17orf98A8MV24 154 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 ST20Q9HBF5 79 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 IL36GQ9NZH8 169 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 SCN8AQ9UQD0 1980 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 HIVEP2P31629 2446 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 CCL5P13501 91 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 COX7A1P24310 79 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 OR4F17Q8NGA8 305 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 SPSB4Q96A44 273 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 IGHV3-66A0A0C4DH42 116 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 ACP1P24666 158 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 MRPL23Q16540 153 aaKnown RBP4.27□□□□□ -1.73
VPS13D-214ENST00000620676 LHFPL6Q9Y693 200 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 PCNX1Q96RV3 2341 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 A0A1W2PRE2 83 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 MPDU1O75352 247 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 RPL39P5Q59GN2 51 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 ZNF479Q96JC4 524 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 TCFL5Q9UL49 500 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 ST8SIA1Q92185 356 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 TBR1Q16650 682 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 MRGPRX1Q96LB2 322 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 JMJD8Q96S16 334 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 C20orf144Q9BQM9 153 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 BOKQ9UMX3 212 aaPredicted RBP4.27□□□□□ -1.73
VPS13D-214ENST00000620676 IGLV1-36A0A0B4J1U3 117 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 GAGE12HA6NDE8 117 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 CYYR1Q96J86 154 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 GPX1P07203 203 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 LINC01590Q5TEZ4 76 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 TMEM167BQ9NRX6 74 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 CRYBA4P53673 196 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 MRPS11P82912 194 aaKnown RBP4.27□□□□□ -1.73
VPS13D-214ENST00000620676 ZNF114Q8NC26 417 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 S4R3C0 116 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 CACNA1IQ9P0X4 2223 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 ITGB4P16144 1822 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 AHDC1Q5TGY3 1603 aaPredicted RBP4.27□□□□□ -1.73
VPS13D-214ENST00000620676 TMEM50AO95807 157 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 MRPS18CQ9Y3D5 142 aaKnown RBP4.27□□□□□ -1.73
VPS13D-214ENST00000620676 HIVEP3Q5T1R4 2406 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 BCORQ6W2J9 1755 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 UBR2Q8IWV8 1755 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 IGKV1D-43A0A0B4J1Z2 117 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 KIR2DL1P43626 348 aaPredicted RBP4.27□□□□□ -1.73
VPS13D-214ENST00000620676 HBBP68871 147 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 LY75O60449 1722 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 KIR2DS5A0A0G2JLQ3 304 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 A0A0G2JNG1 304 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 KIR2DS3K7RE56 304 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 CD1AP06126 327 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 DLX1P56177 255 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 HSPE1P61604 102 aaKnown RBP4.27□□□□□ -1.73
VPS13D-214ENST00000620676 KIR2DS5Q14953 304 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 ONECUT1Q9UBC0 465 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 EPDR1Q9UM22 224 aa4.27□□□□□ -1.73
VPS13D-214ENST00000620676 IGHV5-51A0A0C4DH38 117 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 OR2H2O95918 312 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 ZNF721Q8TF20 911 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 REPIN1Q9BWE0 567 aaKnown RBP4.26□□□□□ -1.73
VPS13D-214ENST00000620676 DUSP15Q9H1R2 295 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-214ENST00000620676 AAMDCQ9H7C9 122 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 TRPM3Q9HCF6 1732 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-214ENST00000620676 MAST2Q6P0Q8 1798 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 IGHV3-72A0A0B4J1Y9 119 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 DPTQ07507 201 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 CYP2G1PQ6ZSU1 146 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 GOLT1AQ6ZVE7 132 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 AICDAQ9GZX7 198 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 C2orf83Q53S99 150 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 MRPS16Q9Y3D3 137 aaKnown RBP4.26□□□□□ -1.73
VPS13D-214ENST00000620676 ZNF826PQ6ZT77 177 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 OR2V2Q96R30 315 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 ABCA3Q99758 1704 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 LTBP3Q9NS15 1303 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 NCR2O95944 276 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 IGLC2P0DOY2 106 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 IGLC3P0DOY3 106 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 ZNF703Q9H7S9 590 aaPredicted RBP4.26□□□□□ -1.73
VPS13D-214ENST00000620676 RAB9BQ9NP90 201 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 TOGARAM1Q9Y4F4 1720 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 IGHV3-49A0A0A0MS15 119 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 ADIPOQQ15848 244 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 TMEM240Q5SV17 173 aa4.26□□□□□ -1.73
VPS13D-214ENST00000620676 FSTP19883 344 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms