RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 DHRS13Q6UX07 377 aa16.82■□□□□ 0.28
NEK3-208ENST00000618534 OR2Z1Q8NG97 314 aa16.82■□□□□ 0.28
NEK3-208ENST00000618534 ZCCHC14Q8WYQ9 949 aaKnown RBP16.82■□□□□ 0.28
NEK3-208ENST00000618534 TBX15Q96SF7 602 aa16.82■□□□□ 0.28
NEK3-208ENST00000618534 IL36BQ9NZH7 164 aa16.82■□□□□ 0.28
NEK3-208ENST00000618534 NCOR1O75376 2440 aa16.82■□□□□ 0.28
NEK3-208ENST00000618534 LEAP2Q969E1 77 aa16.82■□□□□ 0.28
NEK3-208ENST00000618534 TRGV8A0A0C4DH27 118 aa16.81■□□□□ 0.28
NEK3-208ENST00000618534 CD59P13987 128 aa16.81■□□□□ 0.28
NEK3-208ENST00000618534 MRPL18Q9H0U6 180 aaKnown RBP16.81■□□□□ 0.28
NEK3-208ENST00000618534 IGHV2OR16-5A0A0B4J2B6 119 aa16.81■□□□□ 0.28
NEK3-208ENST00000618534 TNFSF10P50591 281 aa16.81■□□□□ 0.28
NEK3-208ENST00000618534 RHOBP62745 196 aa16.81■□□□□ 0.28
NEK3-208ENST00000618534 ZNF124Q15973 351 aa16.81■□□□□ 0.28
NEK3-208ENST00000618534 TEPPQ6URK8 271 aa16.81■□□□□ 0.28
NEK3-208ENST00000618534 Q6ZWC4 215 aa16.81■□□□□ 0.28
NEK3-208ENST00000618534 C9orf106Q8NAJ2 232 aa16.81■□□□□ 0.28
NEK3-208ENST00000618534 DDB2Q92466 427 aa16.81■□□□□ 0.28
NEK3-208ENST00000618534 C15orf61A6NNL5 157 aa16.8■□□□□ 0.28
NEK3-208ENST00000618534 SRRM5B3KS81 715 aa16.8■□□□□ 0.28
NEK3-208ENST00000618534 MGST3O14880 152 aa16.8■□□□□ 0.28
NEK3-208ENST00000618534 ZNRF1Q8ND25 227 aa16.8■□□□□ 0.28
NEK3-208ENST00000618534 DSPP15924 2871 aaKnown RBP16.8■□□□□ 0.28
NEK3-208ENST00000618534 FRMD6-AS1P0C7T7 363 aa16.8■□□□□ 0.28
NEK3-208ENST00000618534 NPY1RP25929 384 aa16.8■□□□□ 0.28
NEK3-208ENST00000618534 MBNL2Q5VZF2 373 aaKnown RBP16.8■□□□□ 0.28
NEK3-208ENST00000618534 SLC24A4Q8NFF2 622 aa16.8■□□□□ 0.28
NEK3-208ENST00000618534 OR4P4Q8NGL7 312 aa16.8■□□□□ 0.28
NEK3-208ENST00000618534 C11orf52Q96A22 123 aa16.8■□□□□ 0.28
NEK3-208ENST00000618534 OPN3Q9H1Y3 402 aaPredicted RBP16.8■□□□□ 0.28
NEK3-208ENST00000618534 TMEM106BQ9NUM4 274 aa16.8■□□□□ 0.28
NEK3-208ENST00000618534 IGHV1-18A0A0C4DH31 117 aa16.79■□□□□ 0.28
NEK3-208ENST00000618534 M0R143 59 aa16.79■□□□□ 0.28
NEK3-208ENST00000618534 F2RL2O00254 374 aa16.79■□□□□ 0.28
NEK3-208ENST00000618534 SERF1AO75920 110 aa16.79■□□□□ 0.28
NEK3-208ENST00000618534 OR1L6Q8NGR2 347 aa16.79■□□□□ 0.28
NEK3-208ENST00000618534 OR4S2Q8NH73 311 aa16.79■□□□□ 0.28
NEK3-208ENST00000618534 CRISP2P16562 243 aa16.79■□□□□ 0.28
NEK3-208ENST00000618534 TPPP2P59282 170 aa16.79■□□□□ 0.28
NEK3-208ENST00000618534 TOMM20LQ6UXN7 152 aa16.79■□□□□ 0.28
NEK3-208ENST00000618534 C1orf162Q8NEQ5 155 aaPredicted RBP16.79■□□□□ 0.28
NEK3-208ENST00000618534 EAF1Q96JC9 268 aaPredicted RBP16.79■□□□□ 0.28
NEK3-208ENST00000618534 CA2P00918 260 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 CGAP01215 116 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 IGLV1-44P01699 117 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 MYOD1P15172 320 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 FOSL1P15407 271 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 IGFBP2P18065 325 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 KIR2DS2P43631 304 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 LGALS4P56470 323 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 OR5I1Q13606 314 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 MSMPQ1L6U9 139 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 CR1LQ2VPA4 569 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 KRTCAP3Q53RY4 240 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 SPRNQ5BIV9 151 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 HES3Q5TGS1 186 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 CALYQ9NYX4 217 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 TRAV9-1A0A075B6T8 112 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 TRGV10A0A0A0MS01 117 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 C9JCJ5 164 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 F2Z2F3 143 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 IGHG3P01860 377 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 OR4A47Q6IF82 309 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 LRP11Q86VZ4 500 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 GCSAMQ8N6F7 178 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 UHRF2Q96PU4 802 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 TUBG2Q9NRH3 451 aa16.78■□□□□ 0.28
NEK3-208ENST00000618534 HEATR1Q9H583 2144 aaKnown RBP16.78■□□□□ 0.28
NEK3-208ENST00000618534 A0A1B0GWJ7 208 aa16.77■□□□□ 0.28
NEK3-208ENST00000618534 ACTL6BO94805 426 aa16.77■□□□□ 0.28
NEK3-208ENST00000618534 MT-CO2P00403 227 aa16.77■□□□□ 0.28
NEK3-208ENST00000618534 RAB4AP20338 218 aa16.77■□□□□ 0.28
NEK3-208ENST00000618534 IER3P46695 156 aa16.77■□□□□ 0.28
NEK3-208ENST00000618534 RPL29P47914 159 aaKnown RBP16.77■□□□□ 0.28
NEK3-208ENST00000618534 MIR17HGQ75NE6 70 aa16.77■□□□□ 0.28
NEK3-208ENST00000618534 PPP1R35Q8TAP8 253 aa16.77■□□□□ 0.28
NEK3-208ENST00000618534 FCN1O00602 326 aa16.77■□□□□ 0.27
NEK3-208ENST00000618534 PAFAH1B2P68402 229 aa16.77■□□□□ 0.27
NEK3-208ENST00000618534 TDRG1Q3Y452 100 aa16.77■□□□□ 0.27
NEK3-208ENST00000618534 FAM216AQ8WUB2 273 aa16.77■□□□□ 0.27
NEK3-208ENST00000618534 HSPB9Q9BQS6 159 aa16.77■□□□□ 0.27
NEK3-208ENST00000618534 TMEM14BQ9NUH8 114 aa16.77■□□□□ 0.27
NEK3-208ENST00000618534 A8MXE2 369 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 ESDP10768 282 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 TDGF1P3P51864 188 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 PRR20EP86478 221 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 PRR20CP86479 221 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 PRR20DP86480 221 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 PRR20BP86481 221 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 PRR20AP86496 221 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 TPTE2P1Q5T6R2 138 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 MMD2Q8IY49 270 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 HINT2Q9BX68 163 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 FOXA2Q9Y261 457 aaPredicted RBP16.76■□□□□ 0.27
NEK3-208ENST00000618534 SAA2-SAA4A0A096LPE2 208 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 SAA2P0DJI9 122 aaPredicted RBP16.76■□□□□ 0.27
NEK3-208ENST00000618534 CDKN1AP38936 164 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 HSPE1P61604 102 aaKnown RBP16.76■□□□□ 0.27
NEK3-208ENST00000618534 MZT1Q08AG7 82 aa16.76■□□□□ 0.27
NEK3-208ENST00000618534 RAB31Q13636 194 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms