RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CD177Q8N6Q3 437 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 ZBTB34Q8NCN2 500 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 OR4C5Q8NGB2 326 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 OR11H6Q8NGC7 330 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 GGHQ92820 318 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 GPR146Q96CH1 333 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 DIRAS2Q96HU8 199 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 SNX22Q96L94 193 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 WWC2-AS2Q96NR7 200 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 ZNF702PQ9H963 129 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 ELL3Q9HB65 397 aaPredicted RBP6.88□□□□□ -1.31
GPC6-202ENST00000617456 MTCH1Q9NZJ7 389 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 STRAPQ9Y3F4 350 aaKnown RBP6.88□□□□□ -1.31
GPC6-202ENST00000617456 COX11Q9Y6N1 276 aa6.88□□□□□ -1.31
GPC6-202ENST00000617456 hADV38S2A0JD32 116 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 SCGB2A1O75556 95 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 ADAP1O75689 374 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 NDUFB8O95169 186 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 ALDOBP05062 364 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 OR8U9P0C7N5 309 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 ZNF728P0DKX0 622 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 SMIM17P0DL12 118 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 TMEM225BP0DP42 221 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 BTCP35070 178 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 ATP1B3P54709 279 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 NDUFA6P56556 154 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 KRTAP10-11P60412 298 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 UBE2V2Q15819 145 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 MINOS1Q5TGZ0 78 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 OR4A47Q6IF82 309 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 CCDC144NLQ6NUI1 221 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 PRSS54Q6PEW0 395 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 BCDIN3DQ7Z5W3 292 aaKnown RBP6.87□□□□□ -1.31
GPC6-202ENST00000617456 NIT1Q86X76 327 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 SAXO1Q8IYX7 474 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 SYS1Q8N2H4 156 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 ISOC2Q96AB3 205 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 BORCS8Q96FH0 119 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 SELENOIQ9C0D9 397 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 INPP5EQ9NRR6 644 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 SERTAD4Q9NUC0 356 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 CACFD1Q9UGQ2 172 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 RAB22AQ9UL26 194 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 LINC00312Q9Y6C7 94 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 MINOS1-NBL1R4GNA1 71 aa6.87□□□□□ -1.31
GPC6-202ENST00000617456 TRBV2A0A0J9YWF9 115 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 SMIM30A4D0T7 59 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 MEGF11A6BM72 1044 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 ODF3BA8MYP8 253 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 AKR1C4P17516 323 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 COX7A1P24310 79 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 LMO1P25800 156 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 F2RL1P55085 397 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 DLX6P56179 175 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 CKS1BP61024 79 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 PAX5Q02548 391 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 ZNF626Q68DY1 528 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 LRRTM1Q86UE6 522 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 TMEM219Q86XT9 240 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 LGI3Q8N145 548 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 Q8N2B8 174 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 GBGT1Q8N5D6 347 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 SLC35G3Q8N808 338 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 CHST4Q8NCG5 386 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 OR4D6Q8NGJ1 314 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 OR1S2Q8NGQ3 325 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 ABHD1Q96SE0 405 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 SLC25A31Q9H0C2 315 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 ARL6Q9H0F7 186 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 MRPS18AQ9NVS2 196 aaKnown RBP6.86□□□□□ -1.31
GPC6-202ENST00000617456 SLC2A8Q9NY64 477 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 OR5AC2Q9NZP5 309 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 JPT1Q9UK76 154 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 HHLA2Q9UM44 414 aa6.86□□□□□ -1.31
GPC6-202ENST00000617456 LOC107986453A0A1B0GWG9 222 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 DAPL1A0PJW8 107 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 IGSF23A1L1A6 192 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 ZNF705EA8MWA4 302 aaPredicted RBP6.85□□□□□ -1.31
GPC6-202ENST00000617456 J3QR06 171 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 MGST3O14880 152 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 HIST1H2BKO60814 126 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 OR2F2O95006 317 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 PF4P02776 101 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 CSN2P05814 226 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 HIST1H2BJP06899 126 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 IGHV1-8P0DP01 117 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 HIST1H2BOP23527 126 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 AZGP1P25311 298 aaKnown RBP6.85□□□□□ -1.31
GPC6-202ENST00000617456 HOXD3P31249 432 aaPredicted RBP6.85□□□□□ -1.31
GPC6-202ENST00000617456 HIST1H2BBP33778 126 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 CAV2P51636 162 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 AKR1C2P52895 323 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 MTCP1P56278 107 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 HIST1H2BDP58876 126 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 HIST1H2BCP62807 126 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 COL10A1Q03692 680 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 ZNF85Q03923 595 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 RAB40BQ12829 278 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 OR2F1Q13607 317 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 HIST2H2BEQ16778 126 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms