RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TMEM250H0YL14 139 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 TGFBR1P36897 503 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 C18orf21Q32NC0 220 aaPredicted RBP2.8□□□□□ -1.96
LPP-220ENST00000617246 NXF2Q9GZY0 626 aaKnown RBP2.8□□□□□ -1.96
LPP-220ENST00000617246 SUMF2Q8NBJ7 301 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 WDR34Q96EX3 536 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 ARHGAP5-AS1Q96IT6 56 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 TRAV34A0A0B4J273 112 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 PAPLNO95428 1278 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 CA2P00918 260 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 VAX1Q5SQQ9 334 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 THAP8Q8NA92 274 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 FBXL7Q9UJT9 491 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 A0A0U1RQS6 177 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 RAB19A4D1S5 217 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 J3QL48 77 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 FBLN7Q53RD9 439 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 MESTQ5EB52 335 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 LRRC3BQ96PB8 259 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 WNT5BQ9H1J7 359 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 DCSTAMPQ9H295 470 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 COQ10BQ9H8M1 238 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 ZNF586Q9NXT0 402 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 SPRR3Q9UBC9 169 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 AK3Q9UIJ7 227 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 NXPH3O95157 252 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 IGHV3-11P01762 117 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 REG1BP48304 166 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 PRSS8Q16651 343 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 PRSS41Q7RTY9 318 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 DAZ1Q9NQZ3 744 aaKnown RBP2.8□□□□□ -1.96
LPP-220ENST00000617246 TRAV10A0A0B4J240 114 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 A0A0J9YW62 118 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 WNT7AO00755 349 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 LINC00869P0C866 280 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 FCGR2BP31994 310 aaPredicted RBP2.8□□□□□ -1.96
LPP-220ENST00000617246 DCTDP32321 178 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 OR2C3Q8N628 320 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 NDUFB11Q9NX14 153 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 PAM16Q9Y3D7 125 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 TCRBV3S1A0A5B6 114 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 MYOZ3Q8TDC0 251 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 RPUSD1Q9UJJ7 312 aaKnown RBP2.8□□□□□ -1.96
LPP-220ENST00000617246 TNFSF18Q9UNG2 199 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 RP1P56715 2156 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 CIDEAO60543 219 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 ZNF205O95201 554 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 GIPP09681 153 aaPredicted RBP2.8□□□□□ -1.96
LPP-220ENST00000617246 POLR2GP62487 172 aaKnown RBP eCLIP2.8□□□□□ -1.96
LPP-220ENST00000617246 HIST2H3PS2Q5TEC6 136 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 LYPD6Q86Y78 171 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 ASB13Q8WXK3 278 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 ZDHHC11Q9H8X9 412 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 UQCC1Q9NVA1 299 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 AK6Q9Y3D8 172 aaKnown RBP2.8□□□□□ -1.96
LPP-220ENST00000617246 IGKV2D-24A0A075B6R9 120 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 EIF3GO75821 320 aaKnown RBP eCLIP2.8□□□□□ -1.96
LPP-220ENST00000617246 RIGQ13278 110 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 SPCS2Q15005 226 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 FA2HQ7L5A8 372 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 TMEM144Q7Z5S9 345 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 ARRDC1Q8N5I2 433 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 PTX4Q96A99 478 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 NOL4LQ96MY1 436 aaPredicted RBP2.8□□□□□ -1.96
LPP-220ENST00000617246 MANBALQ9NQG1 85 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 IGLL5B9A064 214 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 FADS1O60427 444 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 IGKV1D-12P01611 117 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 S100A11P31949 105 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 AQP4P55087 323 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 CKS1BP61024 79 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 PEA15Q15121 130 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 WWC2-AS2Q96NR7 200 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 RNF5Q99942 180 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 OR2C1O95371 312 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 IGF2P01344 180 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 REG1AP05451 166 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 HMGN3Q15651 99 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 RNF165Q6ZSG1 346 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 ANKRD20A5PA0PJZ0 165 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 DNAJC9-AS1A6NH13 148 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 PRSS47A8MTI9 375 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 P01737 135 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 COX6CP09669 75 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 HKR1P10072 659 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 PSG4Q00888 419 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 MDS2Q8NDY4 140 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 TAMM41Q96BW9 452 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 UBE2D4Q9Y2X8 147 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 ZIC3O60481 467 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 SSTR5P35346 364 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 HOXD13P35453 343 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 S100A7L2Q5SY68 101 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 LRRC75AQ8NAA5 344 aa2.8□□□□□ -1.96
LPP-220ENST00000617246 TEX50A0A1B0GTY4 177 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 A0A1W2PPK0 400 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 VENTXO95231 258 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 IGHV3-13P01766 116 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 SLC38A11Q08AI6 406 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 ZNF534Q76KX8 674 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms