RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 IGHV1-69-2A0A0G2JMI3 117 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 C17orf98A8MV24 154 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 ISLRO14498 428 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 ZNF207O43670 478 aaKnown RBP11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 CFIP05156 583 aa11.79□□□□□ -0.52
TNFRSF11A-205ENST00000616710 J3QR89 54 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 WIPI1Q5MNZ9 446 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 RHBDD2Q6NTF9 364 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 C12orf54Q6X4T0 127 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SEPSECSQ9HD40 501 aaKnown RBP11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 IL36GQ9NZH8 169 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 NOTCH3Q9UM47 2321 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 H3BTX0 84 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 FGF12P61328 243 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 DHRS13Q6UX07 377 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 TMEM70Q9BUB7 260 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 DLL3Q9NYJ7 618 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 MRPL49Q13405 166 aaKnown RBP11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 LINC00479Q96M42 142 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 OR2H1Q9GZK4 316 aa11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 YTHDF2Q9Y5A9 579 aaKnown RBP11.78□□□□□ -0.52
TNFRSF11A-205ENST00000616710 LRRC30A6NM36 301 aa11.77□□□□□ -0.52
TNFRSF11A-205ENST00000616710 CCL3P10147 92 aa11.77□□□□□ -0.52
TNFRSF11A-205ENST00000616710 HTR1DP28221 377 aa11.77□□□□□ -0.52
TNFRSF11A-205ENST00000616710 GCHFRP30047 84 aa11.77□□□□□ -0.52
TNFRSF11A-205ENST00000616710 SSTR5P35346 364 aa11.77□□□□□ -0.52
TNFRSF11A-205ENST00000616710 FAM27BQ5VT28 67 aa11.77□□□□□ -0.52
TNFRSF11A-205ENST00000616710 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.52
TNFRSF11A-205ENST00000616710 EAF1Q96JC9 268 aaPredicted RBP11.77□□□□□ -0.52
TNFRSF11A-205ENST00000616710 GP6Q9HCN6 339 aa11.77□□□□□ -0.52
TNFRSF11A-205ENST00000616710 CLEC1BQ9P126 229 aa11.77□□□□□ -0.52
TNFRSF11A-205ENST00000616710 EPHA8P29322 1005 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 C19orf35Q6ZS72 473 aa11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 ANKRD37Q7Z713 158 aa11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 LHFPL4Q7Z7J7 247 aa11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 ZGRF1Q86YA3 2104 aa11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 CDC42EP3Q9UKI2 254 aa11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 HLA-DQA1P01909 254 aa11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 NMUP48645 174 aa11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 FA2HQ7L5A8 372 aa11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 SARAFQ96BY9 339 aa11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 TMEM140Q9NV12 185 aa11.77□□□□□ -0.53
TNFRSF11A-205ENST00000616710 SUMO3P55854 103 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 ARG2P78540 354 aa11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 KCNMB1Q16558 191 aa11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 PRR19A6NJB7 356 aa11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 MS4A5Q9H3V2 200 aa11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 LOC389332A0A1B0GUA5 103 aa11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 MT-ND6P03923 174 aa11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 AMY1AP04745 511 aa11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 SSR4P51571 173 aa11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 CRIP3Q6Q6R5 217 aa11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 RPS19BP1Q86WX3 136 aaKnown RBP11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 TMEM38BQ9NVV0 291 aa11.76□□□□□ -0.53
TNFRSF11A-205ENST00000616710 NUP210LQ5VU65 1888 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 LINC00869P0C866 280 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 UBE2L3P68036 154 aaKnown RBP11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 BHLHA15Q7RTS1 189 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 MTURNQ8N3F0 131 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 DEFB108BQ8NET1 73 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 C10orf35Q96D05 121 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 VWCEQ96DN2 955 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 DUSP13Q9UII6 198 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 FZR1Q9UM11 496 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 FAM181BA6NEQ2 426 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 HIST1H1EP10412 219 aaKnown RBP11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 SLAQ13239 276 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 MIR17HGQ75NE6 70 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 OR1B1Q8NGR6 318 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 TMEM186Q96B77 213 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 CLUHP3Q96NS8 147 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 STRADBQ9C0K7 418 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 TAS2R45P59539 299 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 WFDC3Q8IUB2 231 aa11.75□□□□□ -0.53
TNFRSF11A-205ENST00000616710 IGKV3D-11A0A0A0MRZ8 115 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 TRAV8-6A0A0B4J262 113 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 hCG_38984A0A1B0GV85 526 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 TNFRSF4P43489 277 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 RPL30P62888 115 aaKnown RBP11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 ZNF585BQ52M93 769 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 LSM10Q969L4 123 aaKnown RBP11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 MAP1LC3CQ9BXW4 147 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 SAP30LQ9HAJ7 183 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 K7EN84 100 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 LGALS4P56470 323 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 LINC00310P59036 64 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 YPEL3P61236 119 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 GNG3P63215 75 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 KIR3DL3Q8N743 410 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 SRXN1Q9BYN0 137 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 SH2D2AQ9NP31 389 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 PSG7Q13046 419 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 ZNF826PQ6ZT77 177 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 ZNF295-AS1Q8N0V1 137 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 S1PR3Q99500 378 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 C11orf1Q9H5F2 150 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 THYN1Q9P016 225 aa11.74□□□□□ -0.53
TNFRSF11A-205ENST00000616710 FAM231BA6NCW3 169 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms