RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SAA2-SAA4A0A096LPE2 208 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 SAA2P0DJI9 122 aaPredicted RBP7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 FCGR2BP31994 310 aaPredicted RBP7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 TMEM78Q5T7P6 136 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 TOMM20LQ6UXN7 152 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 OR5AU1Q8NGC0 362 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 SOSTQ9BQB4 213 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 PRSS22Q9GZN4 317 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 DNAJC4Q9NNZ3 241 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 IGKV1-12A0A0C4DH73 117 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 IGKV1D-12P01611 117 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 HKR1P10072 659 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 MAS1LP35410 378 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 MEOX2P50222 304 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 IZUMO4Q1ZYL8 232 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 WDR25Q64LD2 544 aaPredicted RBP7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 COLCA1Q6ZS62 124 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 OR10G8Q8NGN5 311 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 RSG1Q9BU20 258 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 VAMP8Q9BV40 100 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 MYO7BQ6PIF6 2116 aa7.89□□□□□ -1.15
CLTCL1-208ENST00000615606 J3KRW8 73 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 OR2J3O76001 311 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 ZNF137PP52743 207 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 IQCJQ1A5X6 159 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 MIC13Q5XKP0 118 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 TMEM42Q69YG0 159 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 C5orf17Q8NAS9 161 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 CBY3A6NI87 242 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 FREM3P0C091 2139 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 ZNF738Q8NE65 137 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 NPIPB3Q92617 1050 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 ELOVL1Q9BW60 279 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 E7EQL1 145 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 CA2P00918 260 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 HTN1P15515 57 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 SRSF7Q16629 238 aaKnown RBP eCLIP7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 WDR73Q6P4I2 378 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 EAF1Q96JC9 268 aaPredicted RBP7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 SLC25A33Q9BSK2 321 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 FBXL7Q9UJT9 491 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 DIDO1Q9BTC0 2240 aaKnown RBP7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 ELOA3CA0A087WX78 387 aaPredicted RBP7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 TRAV40A0A0B4J280 105 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 FCN1O00602 326 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 TNFSF13O75888 250 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 COX19Q49B96 90 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 AWAT1Q58HT5 328 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 RPRMLQ8N4K4 120 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 NHLRC2Q8NBF2 726 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 ANAPC16Q96DE5 110 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 RPUSD1Q9UJJ7 312 aaKnown RBP7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 GOLT1BQ9Y3E0 138 aa7.88□□□□□ -1.15
CLTCL1-208ENST00000615606 NDUFS8O00217 210 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 CEACAM4O75871 244 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 G0S2P27469 103 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 HNRNPA3P51991 378 aaKnown RBP7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 PTTG1IPP53801 180 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 PSG9Q00887 426 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 ESPL1Q14674 2120 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 FAM166AQ6J272 317 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 IGFL2Q6UWQ7 119 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 NR2C2APQ86WQ0 139 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 STPG2Q8N412 459 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 RBFOX2O43251 390 aaKnown RBP eCLIP7.87□□□□□ -1.158e-6■■□□□ 11.5
CLTCL1-208ENST00000615606 TFF1P04155 84 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 C8orf88P0DMB2 117 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 SULT1A2P50226 295 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 CYB5R2Q6BCY4 276 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 HEPN1Q6WQI6 88 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 GTF2H5Q6ZYL4 71 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 C11orf42Q8N5U0 333 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 OR51G1Q8NGK1 321 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 OR2T8A6NH00 312 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 A6NNC1 897 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 WT1P19544 449 aaPredicted RBP7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 PLAURQ03405 335 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 HGFACQ04756 655 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 RIGQ13278 110 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 GGACTQ9BVM4 153 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 IFI27L2Q9H2X8 130 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 UFC1Q9Y3C8 167 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 NBASA2RRP1 2371 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 OOSP1A8MZH6 123 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 PLAUP00749 431 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 RNASEKQ6P5S7 137 aaKnown RBP7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 GBGT1Q8N5D6 347 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 MRPL32Q9BYC8 188 aaKnown RBP7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 SMDT1Q9H4I9 107 aa7.87□□□□□ -1.15
CLTCL1-208ENST00000615606 EP400Q96L91 3159 aa7.86□□□□□ -1.15
CLTCL1-208ENST00000615606 KIF26AQ9ULI4 1882 aaPredicted RBP7.86□□□□□ -1.15
CLTCL1-208ENST00000615606 IGKV1-27A0A075B6S5 117 aa7.86□□□□□ -1.15
CLTCL1-208ENST00000615606 B4DEV8 164 aa7.86□□□□□ -1.15
CLTCL1-208ENST00000615606 VDAC2P45880 294 aaPredicted RBP7.86□□□□□ -1.15
CLTCL1-208ENST00000615606 TMEM155Q4W5P6 130 aa7.86□□□□□ -1.15
CLTCL1-208ENST00000615606 ISOC2Q96AB3 205 aa7.86□□□□□ -1.15
CLTCL1-208ENST00000615606 RTBDNQ9BSG5 229 aaPredicted RBP7.86□□□□□ -1.15
CLTCL1-208ENST00000615606 TRAF4Q9BUZ4 470 aaPredicted RBP7.86□□□□□ -1.15
CLTCL1-208ENST00000615606 SEC11CQ9BY50 192 aa7.86□□□□□ -1.15
CLTCL1-208ENST00000615606 C21orf62Q9NYP8 219 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms