RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 C10orf113Q5VZT2 155 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 STXBP6Q8NFX7 210 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 ASB13Q8WXK3 278 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 POM121Q96HA1 1249 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 DHRS9Q9BPW9 319 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 MRPL20Q9BYC9 149 aaKnown RBP3.19□□□□□ -1.9
LTN1-207ENST00000614971 GSX1Q9H4S2 264 aaPredicted RBP3.19□□□□□ -1.9
LTN1-207ENST00000614971 XKRY2A2RUG3 117 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 M0QZ24 198 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 BMPR1BO00238 502 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 FABP1P07148 127 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 ARL14EPLP0DKL9 152 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 ANOS1P23352 680 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 GRNP28799 593 aaKnown RBP3.19□□□□□ -1.9
LTN1-207ENST00000614971 TBR1Q16650 682 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 ZNF385CQ66K41 422 aaPredicted RBP3.19□□□□□ -1.9
LTN1-207ENST00000614971 S100A7AQ86SG5 101 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 GLMPQ8WWB7 406 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 NEU1Q99519 415 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 A0A0G2JNJ9 132 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 A0A1B0GU03 582 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 IGHMP01871 453 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 CRYBB3P26998 211 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 EFNB1P98172 346 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 TMEM187Q14656 261 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 SURF2Q15527 256 aaPredicted RBP3.19□□□□□ -1.9
LTN1-207ENST00000614971 ATRAIDQ6UW56 229 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 SGMS2Q8NHU3 365 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 C1QTNF5Q9BXJ0 243 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 SLC2A8Q9NY64 477 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 THYN1Q9P016 225 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 Q9UFV3 132 aa3.19□□□□□ -1.9
LTN1-207ENST00000614971 HELTA6NFD8 242 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 CLDN34H7C241 214 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 J3QRE1 110 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 SRSF10O75494 262 aaKnown RBP3.18□□□□□ -1.9
LTN1-207ENST00000614971 HPRT1P00492 218 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 ZP3P21754 424 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 SRSF3P84103 164 aaKnown RBP3.18□□□□□ -1.9
LTN1-207ENST00000614971 C20orf204Q6ZNR8 217 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 C16orf82Q7Z2V1 217 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 VSTM2AQ8TAG5 236 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 C7orf69Q9H7B7 122 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 IDI2-AS1Q9NZ38 188 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 SLC45A2Q9UMX9 530 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 PGPA6NDG6 321 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 C17orf100A8MU93 164 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 NDUFS7O75251 213 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 CA2P00918 260 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 MGPP08493 103 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 APOBEC3AP31941 199 aaPredicted RBP3.18□□□□□ -1.9
LTN1-207ENST00000614971 AMTP48728 403 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 PDLIM4P50479 330 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 FHL1Q13642 323 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 ZNF474Q6S9Z5 364 aaPredicted RBP3.18□□□□□ -1.9
LTN1-207ENST00000614971 FAM90A1Q86YD7 464 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 OR51G1Q8NGK1 321 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 TAF15Q92804 592 aaKnown RBP eCLIP3.18□□□□□ -1.9
LTN1-207ENST00000614971 KLK15Q9H2R5 256 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 REV3LO60673 3130 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 TRAV20A0A0B4J274 112 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 H0Y980 276 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 H0YIZ8 118 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 GATCO43716 136 aaKnown RBP3.18□□□□□ -1.9
LTN1-207ENST00000614971 MFAP2P55001 183 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 LAMTOR1Q6IAA8 161 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 SSX8Q7RTT4 187 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 FOXD3Q9UJU5 478 aaPredicted RBP3.18□□□□□ -1.9
LTN1-207ENST00000614971 PRNDQ9UKY0 176 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 ZDHHC8Q9ULC8 765 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 AMMECR1Q9Y4X0 333 aaPredicted RBP3.18□□□□□ -1.9
LTN1-207ENST00000614971 IL4P05112 153 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 IGFBP2P18065 325 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 FDX2Q6P4F2 183 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 PQLC2Q6ZP29 291 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 C5orf17Q8NAS9 161 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 GP6Q9HCN6 339 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 FKBP11Q9NYL4 201 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 DSCAMO60469 2012 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 GRIFINA4D1Z8 144 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 SNURFLB1AK76 121 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 ZNF253O75346 499 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 IGFBP3P17936 291 aaPredicted RBP3.18□□□□□ -1.9
LTN1-207ENST00000614971 G0S2P27469 103 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 RPL29P47914 159 aaKnown RBP3.18□□□□□ -1.9
LTN1-207ENST00000614971 RND3P61587 244 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 AKAP13Q12802 2813 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 MLANAQ16655 118 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 RNF212Q495C1 297 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 SIGIRRQ6IA17 410 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 PRSS3P2Q8NHM4 247 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 ZNF596Q8TC21 504 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 Q8WTZ3 238 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 PTX4Q96A99 478 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 NUDT16L1Q9BRJ7 211 aaKnown RBP3.18□□□□□ -1.9
LTN1-207ENST00000614971 PAXXQ9BUH6 204 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 SAA2-SAA4A0A096LPE2 208 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 TRAV3A0A0B4J244 114 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 TRGC2P03986 189 aa3.18□□□□□ -1.9
LTN1-207ENST00000614971 SAA2P0DJI9 122 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms