RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 MRGPRDQ8TDS7 321 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 IL1F10Q8WWZ1 152 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 ZNF391Q9UJN7 358 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 RNF150Q9ULK6 438 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 SIRPB1O00241 398 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 ZNF737O75373 536 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 RBMXL2O75526 392 aaKnown RBP8.28□□□□□ -1.08
GGA3-221ENST00000614198 RBM11P57052 281 aaKnown RBP8.28□□□□□ -1.08
GGA3-221ENST00000614198 ID3Q02535 119 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 RBPJQ06330 500 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 SPANXN5Q5MJ07 72 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 OR4C5Q8NGB2 326 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 NUDT11Q96G61 164 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 CIB3Q96Q77 187 aaPredicted RBP8.28□□□□□ -1.08
GGA3-221ENST00000614198 VKORC1Q9BQB6 163 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 TMEM222Q9H0R3 208 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 JKAMPQ9P055 326 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 TMEM238C9JI98 176 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 PPYP01298 95 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 GCH1P30793 250 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 UBE2V1Q13404 147 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 MMDQ15546 238 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 ATP6V1FQ16864 119 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 FAM78BQ5VT40 261 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 KCNIP4Q6PIL6 250 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 GAPTQ8N292 157 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 OR5A2Q8NGI9 324 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 CMTM2Q8TAZ6 248 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 TMEM56Q96MV1 263 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 SAMD10Q9BYL1 202 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 SLC25A22Q9H936 323 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 PXMP4Q9Y6I8 212 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 TMEM56-RWDD3S4R434 201 aa8.28□□□□□ -1.08
GGA3-221ENST00000614198 DSCAMO60469 2012 aa8.27□□□□□ -1.08
GGA3-221ENST00000614198 UBR5O95071 2799 aaPredicted RBP8.27□□□□□ -1.09
GGA3-221ENST00000614198 ARFGEF3Q5TH69 2177 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 CLEC18AA5D8T8 446 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 TOMM40O96008 361 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 GNG3P63215 75 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 CCL8P80075 99 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 DUX4L9Q6RFH8 374 aaPredicted RBP8.27□□□□□ -1.09
GGA3-221ENST00000614198 STPG4Q8N801 248 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 CLEC18CQ8NCF0 446 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 ST6GALNAC3Q8NDV1 305 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 BTF3L4Q96K17 158 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 FAM103A1Q9BTL3 118 aaKnown RBP8.27□□□□□ -1.09
GGA3-221ENST00000614198 MANBALQ9NQG1 85 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 RNF115Q9Y4L5 304 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 TRAPPC1Q9Y5R8 145 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 GRIFINA4D1Z8 144 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 IQCF6A8MYZ5 107 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 TMEM250H0YL14 139 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 TRAPPC2LH3BP13 241 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 GOSR1O95249 250 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 PPBPP02775 128 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 EGR1P18146 543 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 TPPP2P59282 170 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 MEF2BQ02080 365 aaPredicted RBP8.27□□□□□ -1.09
GGA3-221ENST00000614198 ZNF718Q3SXZ3 478 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 LYG1Q8N1E2 194 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 FGFRL1Q8N441 504 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 SELENOKQ9Y6D0 94 aa8.27□□□□□ -1.09
GGA3-221ENST00000614198 OR5G3P0C626 314 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 IL3RAP26951 378 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 RIPPLY3P57055 190 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 ASCL4Q6XD76 172 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 PLPPR1Q8TBJ4 325 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 PSMG3Q9BT73 122 aaPredicted RBP8.26□□□□□ -1.09
GGA3-221ENST00000614198 TAAR3PQ9P1P4 343 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 UBE2L5PA0A1B0GUS4 154 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 DUXBA0A1W2PPF3 345 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 S100GP29377 79 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 PSMB3P49720 205 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 PAX9P55771 341 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 SELENOHQ8IZQ5 122 aaKnown RBP8.26□□□□□ -1.09
GGA3-221ENST00000614198 VN1R17PQ8TDU5 208 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 PLPPR2Q96GM1 343 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 SLC45A2Q9UMX9 530 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 ZNF469Q96JG9 3925 aaPredicted RBP8.26□□□□□ -1.09
GGA3-221ENST00000614198 TRAV24A0A0B4J272 114 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 LY6HO94772 140 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 ESDP10768 282 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 MDH2P40926 338 aaKnown RBP8.26□□□□□ -1.09
GGA3-221ENST00000614198 UBE2G2P60604 165 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 OR2D3Q8NGH3 330 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 OR2V2Q96R30 315 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 PARLQ9H300 379 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 CCL28Q9NRJ3 127 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 KCNS2Q9ULS6 477 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 CHTOPQ9Y3Y2 248 aaKnown RBP8.26□□□□□ -1.09
GGA3-221ENST00000614198 WIPI2Q9Y4P8 454 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 MPC1Q9Y5U8 109 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 ATP23Q9Y6H3 246 aa8.26□□□□□ -1.09
GGA3-221ENST00000614198 LOC105371242A0A075B767 164 aa8.25□□□□□ -1.09
GGA3-221ENST00000614198 HSBP1L1C9JCN9 74 aa8.25□□□□□ -1.09
GGA3-221ENST00000614198 PSPNO60542 156 aa8.25□□□□□ -1.09
GGA3-221ENST00000614198 SERF2P84101 59 aa8.25□□□□□ -1.09
GGA3-221ENST00000614198 LINC01551Q86U37 167 aa8.25□□□□□ -1.09
GGA3-221ENST00000614198 MOGAT3Q86VF5 341 aa8.25□□□□□ -1.09
GGA3-221ENST00000614198 DEFB108BQ8NET1 73 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms