RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 MLNRO43193 412 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 RBMY1DP0C7P1 496 aaKnown RBP7.55□□□□□ -1.2
TTC28-208ENST00000612946 RBMY1A1P0DJD3 496 aaKnown RBP7.55□□□□□ -1.2
TTC28-208ENST00000612946 RBMY1CP0DJD4 496 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.55□□□□□ -1.2
TTC28-208ENST00000612946 TMEM56-RWDD3S4R434 201 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 MED13Q9UHV7 2174 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 BTCP35070 178 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 OR10J6PQ8NGY7 276 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 METTL26Q96S19 204 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 NCOA6Q14686 2063 aaPredicted RBP7.55□□□□□ -1.2
TTC28-208ENST00000612946 PSMB11A5LHX3 300 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 IFNL4K9M1U5 179 aa7.55□□□□□ -1.2
TTC28-208ENST00000612946 SS18L1O75177 396 aaPredicted RBP7.55□□□□□ -1.2
TTC28-208ENST00000612946 TRAV8-1A0A0A6YYK1 113 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 SRFP11831 508 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 RND2P52198 227 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 B4GALNT1Q00973 533 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 SRSF6Q13247 344 aaKnown RBP7.54□□□□□ -1.2
TTC28-208ENST00000612946 ZNF788Q6ZQV5 615 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 TM2D1Q9BX74 207 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 SPG11Q96JI7 2443 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 A0A1W2PNR3 127 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 BGLAPP02818 100 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 RPL8P62917 257 aaKnown RBP7.54□□□□□ -1.2
TTC28-208ENST00000612946 FAM222BQ8WU58 562 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 MS4A5Q9H3V2 200 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 ZNF32P17041 273 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 UCP1P25874 307 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 CEACAM21Q3KPI0 293 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 MESP1Q9BRJ9 268 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 TANC1Q9C0D5 1861 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 CACNG7P62955 275 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 ZNF703Q9H7S9 590 aaPredicted RBP7.54□□□□□ -1.2
TTC28-208ENST00000612946 TMEM160Q9NX00 188 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 COX5BP10606 129 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 RNF182Q8N6D2 247 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 VWA8A3KMH1 1905 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 TRAV14DV4A0A0A6YYC5 116 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 TRAV8-6A0A0B4J262 113 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 HIGD1CA8MV81 97 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 VN1R2Q8NFZ6 395 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 PRR13Q9NZ81 148 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 SBF1O95248 1867 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 K7EP34 96 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 LILRA3Q8N6C8 439 aaPredicted RBP7.54□□□□□ -1.2
TTC28-208ENST00000612946 GPR82Q96P67 336 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 A6NNC1 897 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 KLF17Q5JT82 389 aaPredicted RBP7.54□□□□□ -1.2
TTC28-208ENST00000612946 FAM27BQ5VT28 67 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 LINC00470Q9BZP3 86 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 FAM117AQ9C073 453 aa7.54□□□□□ -1.2
TTC28-208ENST00000612946 FAM157AC9JC47 383 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 DEFB133Q30KQ1 61 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 C12orf49Q9H741 205 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 SEMA5BQ9P283 1151 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 MYO18BQ8IUG5 2567 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 PGLYRP1O75594 196 aaPredicted RBP7.53□□□□□ -1.2
TTC28-208ENST00000612946 C9orf153Q5TBE3 101 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 GGTLC1Q9BX51 225 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 TMEM14DPA8MWL7 114 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 NDUFC2O95298 119 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 OR4A5Q8NH83 315 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 WNT9BO14905 357 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 PGFP49763 221 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 A0A096LPE4 126 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 A0A1W2PPZ6 126 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 TIMP3P35625 211 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 GAGE12JA6NER3 117 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 C9orf118A6NHY6 69 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 TNFSF14O43557 240 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 GAGE7O76087 117 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 GAGE12FP0CL80 117 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 GAGE12GP0CL81 117 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 GAGE12IP0CL82 117 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 ADMP35318 185 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 GAGE4Q13068 117 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 TSKUQ8WUA8 353 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 FCGR2BP31994 310 aaPredicted RBP7.53□□□□□ -1.2
TTC28-208ENST00000612946 Q0VG73 95 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 KIR3DS1Q14943 382 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 MIC13Q5XKP0 118 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 ZNF683Q8IZ20 524 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 WNT2BQ93097 391 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 FCN3O75636 299 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 SRSF7Q16629 238 aaKnown RBP eCLIP7.53□□□□□ -1.2
TTC28-208ENST00000612946 FER1L6-AS1Q8NA97 138 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 SIRT4Q9Y6E7 314 aaPredicted RBP7.53□□□□□ -1.2
TTC28-208ENST00000612946 TNCP24821 2201 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 IGHV4-34P06331 123 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 TMEM258P61165 79 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 LHX8Q68G74 356 aa7.53□□□□□ -1.2
TTC28-208ENST00000612946 KIF26AQ9ULI4 1882 aaPredicted RBP7.53□□□□□ -1.2
TTC28-208ENST00000612946 UPK3AO75631 287 aa7.52□□□□□ -1.2
TTC28-208ENST00000612946 IL11RAQ14626 422 aa7.52□□□□□ -1.2
TTC28-208ENST00000612946 LAIR2Q6ISS4 152 aa7.52□□□□□ -1.2
TTC28-208ENST00000612946 KLHDC9Q8NEP7 349 aa7.52□□□□□ -1.2
TTC28-208ENST00000612946 ANAPC1Q9H1A4 1944 aa7.52□□□□□ -1.2
TTC28-208ENST00000612946 PRR14LQ5THK1 2151 aa7.52□□□□□ -1.2
TTC28-208ENST00000612946 LYL1P12980 280 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms