RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 C14orf144Q96I85 54 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 WFIKKN1Q96NZ8 548 aa12.13□□□□□ -0.47
CDH1-213ENST00000612417 DPRXA6NFQ7 191 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 PRSS47A8MTI9 375 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 ITGB1BP1O14713 200 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 FCGR3BO75015 233 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 VENTXO95231 258 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 CD1BP29016 333 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 PLA2G5P39877 138 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 KIR2DS2P43631 304 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 CDC34P49427 236 aaPredicted RBP12.12□□□□□ -0.47
CDH1-213ENST00000612417 SPINK9Q5DT21 86 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 SSX8Q7RTT4 187 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 C16orf82Q7Z2V1 217 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 OR10A7Q8NGE5 316 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 OR4F5Q8NH21 305 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 Q8TCH9 128 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 RPUSD4Q96CM3 377 aaKnown RBP12.12□□□□□ -0.47
CDH1-213ENST00000612417 OR4F4Q96R69 305 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 SRD5A3Q9H8P0 318 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 GAB2Q9UQC2 676 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 DSCAMO60469 2012 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 SPRY3O43610 288 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 SOD3P08294 240 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 CHRNB4P30926 498 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 C9orf152Q5JTZ5 239 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 OR51G1Q8NGK1 321 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 GATAD1Q8WUU5 269 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 NEIL1Q96FI4 390 aaPredicted RBP12.12□□□□□ -0.47
CDH1-213ENST00000612417 IFI27L2Q9H2X8 130 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 NGBQ9NPG2 151 aa12.12□□□□□ -0.47
CDH1-213ENST00000612417 LHBP01229 141 aa12.11□□□□□ -0.47
CDH1-213ENST00000612417 VDAC2P45880 294 aaPredicted RBP12.11□□□□□ -0.47
CDH1-213ENST00000612417 RPS16P62249 146 aaKnown RBP12.11□□□□□ -0.47
CDH1-213ENST00000612417 PRAMEF5Q5TYX0 476 aa12.11□□□□□ -0.47
CDH1-213ENST00000612417 ANAPC16Q96DE5 110 aa12.11□□□□□ -0.47
CDH1-213ENST00000612417 PRSS46E5RG02 174 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 M0R1X1 148 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 PAGE4O60829 102 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 CGB3P0DN86 165 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 CGB7P0DN87 165 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 ERVK-16P61578 105 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 TLE1Q04724 770 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 LTC4SQ16873 150 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 DNLZQ5SXM8 178 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 NUP37Q8NFH4 326 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 OR4A16Q8NH70 328 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 DDB2Q92466 427 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 MEGF10Q96KG7 1140 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 IGLV3-9A0A075B6K5 115 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 H7BYZ3 331 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 OPRK1P41145 380 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 ZNF134P52741 427 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 RELBQ01201 579 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 GFI1BQ5VTD9 330 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 RAB9BQ9NP90 201 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 PITPNC1Q9UKF7 332 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 KALRNO60229 2985 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 ACACBO00763 2458 aa12.1□□□□□ -0.47
CDH1-213ENST00000612417 C11orf94C9JXX5 98 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 PDE6DO43924 150 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 GATA4P43694 442 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 GALR1P47211 349 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 RAB7AP51149 207 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 RPL39P5Q59GN2 51 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 SAPCD1Q5SSQ6 148 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 S1PR3Q99500 378 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 CALYQ9NYX4 217 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 RELNP78509 3460 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 HRASP01112 189 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 TREML4Q6UXN2 200 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.09□□□□□ -0.47
CDH1-213ENST00000612417 ZNRF1Q8ND25 227 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 OR10D4PQ8NGN7 298 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 OR4S2Q8NH73 311 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 FAM222BQ8WU58 562 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 OR5B12Q96R08 314 aa12.09□□□□□ -0.47
CDH1-213ENST00000612417 IGHV3OR15-7A0A075B7D8 119 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 GYPAP02724 150 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 DEFA4P12838 97 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 ADORA2A-AS1P86434 159 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 MOGAT3Q86VF5 341 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 OR4X1Q8NH49 305 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 LINC01560Q8TB33 94 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 ITLN1Q8WWA0 313 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 RNASE6Q93091 150 aaKnown RBP12.08□□□□□ -0.48
CDH1-213ENST00000612417 TXNDC17Q9BRA2 123 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 HEYLQ9NQ87 328 aaPredicted RBP12.08□□□□□ -0.48
CDH1-213ENST00000612417 KCNIP2Q9NS61 270 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 TMEM140Q9NV12 185 aa12.08□□□□□ -0.48
CDH1-213ENST00000612417 RRHO14718 337 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 TMPRSS2O15393 492 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 OR4A8P0C604 315 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 TNFSF4P23510 183 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 NPPCP23582 126 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 C17orf58Q2M2W7 97 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 SPRNQ5BIV9 151 aa12.07□□□□□ -0.48
CDH1-213ENST00000612417 PLPPR2Q96GM1 343 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms