RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 EIF5A2Q9GZV4 153 aaKnown RBP15.94■□□□□ 0.14
SRRM3-205ENST00000612155 RBFOX2O43251 390 aaKnown RBP eCLIP15.93■□□□□ 0.14
SRRM3-205ENST00000612155 S100A6P06703 90 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 H2AFB1P0C5Y9 115 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 RAB7AP51149 207 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 HBG1P69891 147 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 HBG2P69892 147 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 SLC25A24Q6NUK1 477 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 SSX7Q7RTT5 188 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 WDR61Q9GZS3 305 aaKnown RBP15.93■□□□□ 0.14
SRRM3-205ENST00000612155 RPRMQ9NS64 109 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 RPUSD1Q9UJJ7 312 aaKnown RBP15.93■□□□□ 0.14
SRRM3-205ENST00000612155 A0A1B0GW64 132 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 PEA15Q15121 130 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 ZNF726P1Q15940 193 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 TMEM200BQ69YZ2 307 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 ETV3LQ6ZN32 361 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 RAB39BQ96DA2 213 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 S1PR3Q99500 378 aa15.93■□□□□ 0.14
SRRM3-205ENST00000612155 UBE2L5PA0A1B0GUS4 154 aa15.92■□□□□ 0.14
SRRM3-205ENST00000612155 RBMXL2O75526 392 aaKnown RBP15.92■□□□□ 0.14
SRRM3-205ENST00000612155 LYG1Q8N1E2 194 aa15.92■□□□□ 0.14
SRRM3-205ENST00000612155 SCGB1C1Q8TD33 95 aa15.92■□□□□ 0.14
SRRM3-205ENST00000612155 CSPG4Q6UVK1 2322 aa15.92■□□□□ 0.14
SRRM3-205ENST00000612155 OR8U8P0C7N1 319 aa15.92■□□□□ 0.14
SRRM3-205ENST00000612155 RELBQ01201 579 aa15.92■□□□□ 0.14
SRRM3-205ENST00000612155 DHRS7BQ6IAN0 325 aaPredicted RBP15.92■□□□□ 0.14
SRRM3-205ENST00000612155 ARL6IP6Q8N6S5 226 aa15.92■□□□□ 0.14
SRRM3-205ENST00000612155 SFT2D1Q8WV19 159 aa15.92■□□□□ 0.14
SRRM3-205ENST00000612155 PARD6GQ9BYG4 376 aaPredicted RBP15.92■□□□□ 0.14
SRRM3-205ENST00000612155 LINC00312Q9Y6C7 94 aa15.92■□□□□ 0.14
SRRM3-205ENST00000612155 LOC105371242A0A075B767 164 aa15.91■□□□□ 0.14
SRRM3-205ENST00000612155 C15orf62A8K5M9 175 aa15.91■□□□□ 0.14
SRRM3-205ENST00000612155 CEBPZOSA8MTT3 80 aa15.91■□□□□ 0.14
SRRM3-205ENST00000612155 SNAPINO95295 136 aa15.91■□□□□ 0.14
SRRM3-205ENST00000612155 CLRN3Q8NCR9 226 aa15.91■□□□□ 0.14
SRRM3-205ENST00000612155 LFNGQ8NES3 379 aa15.91■□□□□ 0.14
SRRM3-205ENST00000612155 TAF15Q92804 592 aaKnown RBP eCLIP15.91■□□□□ 0.14
SRRM3-205ENST00000612155 HIPK2Q9H2X6 1198 aa15.91■□□□□ 0.14
SRRM3-205ENST00000612155 hADV38S2A0JD32 116 aa15.9■□□□□ 0.14
SRRM3-205ENST00000612155 HNF4GQ14541 408 aa15.9■□□□□ 0.14
SRRM3-205ENST00000612155 SLC25A48Q6ZT89 311 aaKnown RBP15.9■□□□□ 0.14
SRRM3-205ENST00000612155 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.9■□□□□ 0.14
SRRM3-205ENST00000612155 PSMG3Q9BT73 122 aaPredicted RBP15.9■□□□□ 0.14
SRRM3-205ENST00000612155 RAB9BQ9NP90 201 aa15.9■□□□□ 0.14
SRRM3-205ENST00000612155 TMEM140Q9NV12 185 aa15.9■□□□□ 0.14
SRRM3-205ENST00000612155 PRELID3BQ9Y3B1 194 aa15.9■□□□□ 0.14
SRRM3-205ENST00000612155 TNCP24821 2201 aa15.9■□□□□ 0.14
SRRM3-205ENST00000612155 TLN2Q9Y4G6 2542 aa15.9■□□□□ 0.14
SRRM3-205ENST00000612155 PPIAL4CA0A0B4J2A2 164 aa15.9■□□□□ 0.14
SRRM3-205ENST00000612155 FAM90A9PA6NNJ1 464 aa15.9■□□□□ 0.14
SRRM3-205ENST00000612155 EIF3GO75821 320 aaKnown RBP eCLIP15.9■□□□□ 0.14
SRRM3-205ENST00000612155 PPIAL4GP0DN37 164 aa15.9■□□□□ 0.14
SRRM3-205ENST00000612155 ABCA1O95477 2261 aa15.89■□□□□ 0.14
SRRM3-205ENST00000612155 NQO2P16083 231 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 ATF4P18848 351 aaPredicted RBP15.89■□□□□ 0.13
SRRM3-205ENST00000612155 LOXL1Q08397 574 aaPredicted RBP15.89■□□□□ 0.13
SRRM3-205ENST00000612155 DPPA3Q6W0C5 159 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 RBFOX3A6NFN3 312 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 IGKV1D-33P01593 117 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 IGKV1-33P01594 117 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 CT45A6P0DMU7 189 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 CT45A5P0DMU8 189 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 CT45A7P0DMV0 189 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 KIR2DS2P43631 304 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 VDAC2P45880 294 aaPredicted RBP15.89■□□□□ 0.13
SRRM3-205ENST00000612155 ARF6P62330 175 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 HAGHQ16775 308 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 KIAA1456Q9P272 454 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 ONECUT1Q9UBC0 465 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 KPTNQ9Y664 436 aa15.89■□□□□ 0.13
SRRM3-205ENST00000612155 IFNA17P01571 189 aa15.88■□□□□ 0.13
SRRM3-205ENST00000612155 ARG1P05089 322 aa15.88■□□□□ 0.13
SRRM3-205ENST00000612155 OR13C7P0DN81 318 aa15.88■□□□□ 0.13
SRRM3-205ENST00000612155 THBS3P49746 956 aa15.88■□□□□ 0.13
SRRM3-205ENST00000612155 MEF2CQ06413 473 aaPredicted RBP15.88■□□□□ 0.13
SRRM3-205ENST00000612155 ICAM4Q14773 271 aa15.88■□□□□ 0.13
SRRM3-205ENST00000612155 TMEM249Q2WGJ8 235 aa15.88■□□□□ 0.13
SRRM3-205ENST00000612155 OR4S2Q8NH73 311 aa15.88■□□□□ 0.13
SRRM3-205ENST00000612155 TMEM170AQ8WVE7 144 aa15.88■□□□□ 0.13
SRRM3-205ENST00000612155 CIB3Q96Q77 187 aaPredicted RBP15.88■□□□□ 0.13
SRRM3-205ENST00000612155 SLC35B3Q9H1N7 401 aa15.88■□□□□ 0.13
SRRM3-205ENST00000612155 MDKP21741 143 aaPredicted RBP15.87■□□□□ 0.13
SRRM3-205ENST00000612155 PAX2Q02962 417 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 ACSM6Q6P461 480 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 CENPVQ7Z7K6 275 aaPredicted RBP15.87■□□□□ 0.13
SRRM3-205ENST00000612155 OR4A16Q8NH70 328 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 RCC1LQ96I51 464 aaKnown RBP15.87■□□□□ 0.13
SRRM3-205ENST00000612155 PBDC1Q9BVG4 233 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 TMEM147Q9BVK8 224 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.87■□□□□ 0.13
SRRM3-205ENST00000612155 TRAV1-1A0A0B4J248 108 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 BTBD17A6NE02 478 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 FBP1P09467 338 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 MYOD1P15172 320 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 AKR1C3P42330 323 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 ELLP55199 621 aaPredicted RBP15.87■□□□□ 0.13
SRRM3-205ENST00000612155 SPCS3P61009 180 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 VWC2Q2TAL6 325 aa15.87■□□□□ 0.13
SRRM3-205ENST00000612155 PDLIM3Q53GG5 364 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms