RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 COLCA1Q6ZS62 124 aa9.95□□□□□ -0.82
TP53-220ENST00000610623 FGF23Q9GZV9 251 aaPredicted RBP9.95□□□□□ -0.82
TP53-220ENST00000610623 RNF24Q9Y225 148 aa9.95□□□□□ -0.82
TP53-220ENST00000610623 EML6Q6ZMW3 1958 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 BMPR1BO00238 502 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 DNPH1O43598 174 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 AMY1AP04745 511 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 LINC00869P0C866 280 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 EDDM3BP56851 147 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 MAJINQ3KP22 176 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 PRR27Q6MZM9 219 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 CT55Q8WUE5 264 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 FOXB1Q99853 325 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 HES4Q9HCC6 221 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 J3QR06 171 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 MT-CO2P00403 227 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 IGLL1P15814 213 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 OTX2P32243 289 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 G6PCP35575 357 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 CARD18P57730 90 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 TBR1Q16650 682 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 KIAA1644Q3SXP7 199 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 ATOH7Q8N100 152 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 DLL3Q9NYJ7 618 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 MED12Q93074 2177 aa9.94□□□□□ -0.82
TP53-220ENST00000610623 LAMA1P25391 3075 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 CDIPTO14735 213 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 TAX1BP3O14907 124 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 RAB29O14966 203 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 ZIC3O60481 467 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 P04436 131 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 PSG1P11464 419 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 NTF3P20783 257 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 FAM19A2Q8N3H0 131 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 OR2D2Q9H210 308 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 YTHDF2Q9Y5A9 579 aaKnown RBP9.93□□□□□ -0.82
TP53-220ENST00000610623 KIAA1549Q9HCM3 1950 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 AREGP15514 252 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 OR4A47Q6IF82 309 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 OR8B3Q8NGG8 313 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 FGFBP3Q8TAT2 258 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 OR8B2Q96RD0 313 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 OSTCQ9NRP0 149 aa9.93□□□□□ -0.82
TP53-220ENST00000610623 WISP2O76076 250 aa9.92□□□□□ -0.82
TP53-220ENST00000610623 AVPP01185 164 aa9.92□□□□□ -0.82
TP53-220ENST00000610623 LCN12Q6JVE5 192 aa9.92□□□□□ -0.82
TP53-220ENST00000610623 DEFB125Q8N687 156 aa9.92□□□□□ -0.82
TP53-220ENST00000610623 ZNF645Q8N7E2 425 aa9.92□□□□□ -0.82
TP53-220ENST00000610623 ZNF596Q8TC21 504 aa9.92□□□□□ -0.82
TP53-220ENST00000610623 BCL2L2Q92843 193 aaPredicted RBP9.92□□□□□ -0.82
TP53-220ENST00000610623 CCDC140Q96MF4 163 aa9.92□□□□□ -0.82
TP53-220ENST00000610623 FAM181BA6NEQ2 426 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 C15orf62A8K5M9 175 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 SYNGR1O43759 233 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 RAMP3O60896 148 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 CLDN14O95500 239 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 APCSP02743 223 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 GCHFRP30047 84 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 CLDN18P56856 261 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 ARF6P62330 175 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 CATR1Q13166 79 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 PDLIM3Q53GG5 364 aaPredicted RBP9.91□□□□□ -0.82
TP53-220ENST00000610623 FAM71F2Q6NXP2 309 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 SPRY4Q9C004 299 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 ST20Q9HBF5 79 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 ARL2-SNX15V9GYD0 113 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 A0A0J9YW62 118 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 RRHO14718 337 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 TM4SF5O14894 197 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 GNG4P50150 75 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 RAC3P60763 192 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 RPS16P62249 146 aaKnown RBP9.91□□□□□ -0.82
TP53-220ENST00000610623 CEACAM16Q2WEN9 425 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 SPATA46Q5T0L3 261 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 RASL11AQ6T310 242 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 CLEC2AQ6UVW9 174 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 PET117Q6UWS5 81 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 C12orf54Q6X4T0 127 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 H2BFWTQ7Z2G1 175 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 C18orf32Q8TCD1 76 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 KCNIP1Q9NZI2 227 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 TRAPPC2LQ9UL33 140 aa9.91□□□□□ -0.82
TP53-220ENST00000610623 GAGE12BA1L429 117 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 ISLRO14498 428 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 HSBP1O75506 76 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 CD59P13987 128 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 UBE2G1P62253 170 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 Q0VFX4 171 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 MPV17L2Q567V2 206 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 ZNF497Q6ZNH5 498 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 AAED1Q7RTV5 226 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 MRPL21Q7Z2W9 205 aaKnown RBP9.9□□□□□ -0.82
TP53-220ENST00000610623 MDFIQ99750 246 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 SRXN1Q9BYN0 137 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 TNRC6AQ8NDV7 1962 aaKnown RBP9.9□□□□□ -0.82
TP53-220ENST00000610623 SMIM27A0A1W2PRY6 76 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 HELTA6NFD8 242 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 G3V3Y1 287 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 SPINK4O60575 86 aa9.9□□□□□ -0.82
TP53-220ENST00000610623 RBMXL2O75526 392 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms