RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 LRRC10Q5BKY1 277 aa12.99□□□□□ -0.33
CTSA-214ENST00000606788 OR51B2Q9Y5P1 312 aa12.99□□□□□ -0.33
CTSA-214ENST00000606788 VPS13CQ709C8 3753 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 CRYBG3Q68DQ2 2970 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 OR2C1O95371 312 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 CA2P00918 260 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 RITA1Q96K30 269 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 HARBI1Q96MB7 349 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 ENY2Q9NPA8 101 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 NDRG3Q9UGV2 375 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 ZNF506Q5JVG8 444 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 C19orf35Q6ZS72 473 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 NIPSNAP3BQ9BS92 247 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 LINC00312Q9Y6C7 94 aa12.98□□□□□ -0.33
CTSA-214ENST00000606788 UTP20O75691 2785 aaKnown RBP12.98□□□□□ -0.33
CTSA-214ENST00000606788 E7EUB6 86 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 PAGE4O60829 102 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 REG1AP05451 166 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 SAA1P0DJI8 122 aaPredicted RBP12.97□□□□□ -0.33
CTSA-214ENST00000606788 PAX5Q02548 391 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 SLC25A48Q6ZT89 311 aaKnown RBP12.97□□□□□ -0.33
CTSA-214ENST00000606788 NECAP1Q8NC96 275 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 OR4F5Q8NH21 305 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 OR4F4Q96R69 305 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 J3QR06 171 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 APOBEC3AP31941 199 aaPredicted RBP12.97□□□□□ -0.33
CTSA-214ENST00000606788 VDAC2P45880 294 aaPredicted RBP12.97□□□□□ -0.33
CTSA-214ENST00000606788 THBS3P49746 956 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 SERF2P84101 59 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 ADORA2A-AS1P86434 159 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 PDLIM3Q53GG5 364 aaPredicted RBP12.97□□□□□ -0.33
CTSA-214ENST00000606788 OR51G1Q8NGK1 321 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 PSMG3Q9BT73 122 aaPredicted RBP12.97□□□□□ -0.33
CTSA-214ENST00000606788 C15orf61A6NNL5 157 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 LOXP28300 417 aaPredicted RBP12.97□□□□□ -0.33
CTSA-214ENST00000606788 CA7P43166 264 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 CST9LP1Q5W188 147 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 TREML4Q6UXN2 200 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 SSX3Q99909 188 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 GAL3ST2Q9H3Q3 398 aa12.97□□□□□ -0.33
CTSA-214ENST00000606788 FAM208BQ5VWN6 2430 aa12.96□□□□□ -0.33
CTSA-214ENST00000606788 HNF1AP20823 631 aa12.96□□□□□ -0.33
CTSA-214ENST00000606788 LGALS4P56470 323 aa12.96□□□□□ -0.33
CTSA-214ENST00000606788 TPSG1Q9NRR2 321 aa12.96□□□□□ -0.33
CTSA-214ENST00000606788 IGHV3-21A0A0B4J1V1 117 aa12.96□□□□□ -0.34
CTSA-214ENST00000606788 NPY1RP25929 384 aa12.96□□□□□ -0.34
CTSA-214ENST00000606788 KLRB1Q12918 225 aa12.96□□□□□ -0.34
CTSA-214ENST00000606788 ADIRFQ15847 76 aa12.96□□□□□ -0.34
CTSA-214ENST00000606788 SPATA31B1PQ5VZV4 182 aa12.96□□□□□ -0.34
CTSA-214ENST00000606788 BTBD17A6NE02 478 aa12.95□□□□□ -0.34
CTSA-214ENST00000606788 RTL8BQ17RB0 113 aa12.95□□□□□ -0.34
CTSA-214ENST00000606788 ARSJQ5FYB0 599 aaPredicted RBP12.95□□□□□ -0.34
CTSA-214ENST00000606788 FAM90A2PQ658T7 463 aa12.95□□□□□ -0.34
CTSA-214ENST00000606788 TCTEX1D1Q8N7M0 179 aa12.95□□□□□ -0.34
CTSA-214ENST00000606788 SLC24A4Q8NFF2 622 aa12.95□□□□□ -0.34
CTSA-214ENST00000606788 RPS10P46783 165 aaKnown RBP12.95□□□□□ -0.34
CTSA-214ENST00000606788 SNRPEP62304 92 aaKnown RBP12.95□□□□□ -0.34
CTSA-214ENST00000606788 LHFPL4Q7Z7J7 247 aa12.95□□□□□ -0.34
CTSA-214ENST00000606788 MGST2Q99735 147 aa12.95□□□□□ -0.34
CTSA-214ENST00000606788 A0A1W2PPV4 95 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 HSPB1P04792 205 aaKnown RBP12.94□□□□□ -0.34
CTSA-214ENST00000606788 CDC34P49427 236 aaPredicted RBP12.94□□□□□ -0.34
CTSA-214ENST00000606788 HSPE1P61604 102 aaKnown RBP12.94□□□□□ -0.34
CTSA-214ENST00000606788 KHDC3LQ587J8 217 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 TGIF2-C20orf24A0A0A6YYL0 155 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 IGFBP2P18065 325 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 CD81P60033 236 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 HEPN1Q6WQI6 88 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 KDF1Q8NAX2 398 aaPredicted RBP12.94□□□□□ -0.34
CTSA-214ENST00000606788 PGPEP1LA6NFU8 196 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 SLC25A17O43808 307 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 NDUFS7O75251 213 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 HRASP01112 189 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 CD24P25063 80 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 CNTFRP26992 372 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 HABP2Q14520 560 aaPredicted RBP12.94□□□□□ -0.34
CTSA-214ENST00000606788 MBD3L1Q8WWY6 194 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 SMIM7Q9BQ49 75 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 ACTR3CQ9C0K3 210 aaPredicted RBP12.94□□□□□ -0.34
CTSA-214ENST00000606788 PLEKHA3Q9HB20 300 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 PXMP4Q9Y6I8 212 aa12.94□□□□□ -0.34
CTSA-214ENST00000606788 ATP5G3P48201 142 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 RAB13P51153 203 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 GNB2P62879 340 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 SP5Q6BEB4 398 aaPredicted RBP12.93□□□□□ -0.34
CTSA-214ENST00000606788 Q8N7P7 452 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 FAM216AQ8WUB2 273 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 TVP23CQ96ET8 276 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 DIRC2Q96SL1 478 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 SIRT7Q9NRC8 400 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 PRELID1Q9Y255 219 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 RBFOX2O43251 390 aaKnown RBP eCLIP12.93□□□□□ -0.34
CTSA-214ENST00000606788 YIF1AO95070 293 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 UQCRFS1P47985 274 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 ATP6V1FQ16864 119 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 ACY3Q96HD9 319 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 DERL1Q9BUN8 251 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 WDR83OSQ9Y284 106 aa12.93□□□□□ -0.34
CTSA-214ENST00000606788 CTXND1A0A1B0GTU2 59 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 ABHD5Q8WTS1 349 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms