RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ADAT3Q96EY9 351 aaPredicted RBP7.4□□□□□ -1.23
COMMD3-215ENST00000602574 APOOQ9BUR5 198 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 NAA60Q9H7X0 242 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 Q9Y3F1 56 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 R4GN57 208 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 V9GYY9 64 aa7.4□□□□□ -1.23
COMMD3-215ENST00000602574 MBD3L4A6NDZ8 208 aaPredicted RBP7.39□□□□□ -1.23
COMMD3-215ENST00000602574 MBD3L3A6NE82 208 aaPredicted RBP7.39□□□□□ -1.23
COMMD3-215ENST00000602574 CASTOR2A6NHX0 329 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 MBD3L5A6NJ08 208 aaPredicted RBP7.39□□□□□ -1.23
COMMD3-215ENST00000602574 NPFFO15130 113 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 OR5AL1P0C617 328 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 DYNLT3P51808 116 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 FHL3Q13643 280 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 NMSQ5H8A3 153 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 DMRTC1Q5HYR2 192 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 PRR22Q8IZ63 422 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 CRIPAKQ8N1N5 446 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 TMEM255BQ8WV15 326 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 DNAJA3Q96EY1 480 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 MMABQ96EY8 250 aaPredicted RBP7.39□□□□□ -1.23
COMMD3-215ENST00000602574 OR2H1Q9GZK4 316 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 ZNF286AQ9HBT8 521 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 DLL3Q9NYJ7 618 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 TIMM9Q9Y5J7 89 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 hDV102S1A0JD36 115 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 FAM24AA6NFZ4 105 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 MANSC4A6NHS7 340 aaPredicted RBP7.39□□□□□ -1.23
COMMD3-215ENST00000602574 UPK3BL1B0FP48 263 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 GGTLC3B5MD39 225 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 UPK3BL2E5RIL1 263 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 BMPR1BO00238 502 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 TIMM8AO60220 97 aaPredicted RBP7.39□□□□□ -1.23
COMMD3-215ENST00000602574 TBL1XO60907 577 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 CRLF1O75462 422 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 CPMP14384 443 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 IER3P46695 156 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 INSL3P51460 131 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 SLC22A18ASQ8N1D0 253 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 OR9G1Q8NH87 305 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 C4orf45Q96LM5 186 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 TTTY10Q9BZA0 68 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 BPIFA1Q9NP55 256 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 SLC39A9Q9NUM3 307 aa7.39□□□□□ -1.23
COMMD3-215ENST00000602574 TIMM13Q9Y5L4 95 aaPredicted RBP7.39□□□□□ -1.23
COMMD3-215ENST00000602574 TINCRA0A1B0GVN0 87 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 A0A1W2PPC4 97 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 OTOL1A6NHN0 477 aaPredicted RBP7.38□□□□□ -1.23
COMMD3-215ENST00000602574 BNIP3LO60238 219 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 ZNF20P17024 532 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 IBA57Q5T440 356 aaKnown RBP7.38□□□□□ -1.23
COMMD3-215ENST00000602574 FAM19A2Q8N3H0 131 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 PHLDA1Q8WV24 401 aaPredicted RBP7.38□□□□□ -1.23
COMMD3-215ENST00000602574 H1FXQ92522 213 aaKnown RBP7.38□□□□□ -1.23
COMMD3-215ENST00000602574 SRSF8Q9BRL6 282 aaKnown RBP7.38□□□□□ -1.23
COMMD3-215ENST00000602574 TP73-AS1Q9UF72 201 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 OR1A2Q9Y585 309 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 AMY1AP04745 511 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 MRPS6P82932 125 aaKnown RBP7.38□□□□□ -1.23
COMMD3-215ENST00000602574 VGLL4Q14135 290 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 PMVKQ15126 192 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 SPRNQ5BIV9 151 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 PSMG4Q5JS54 123 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 FAM120AOSQ5T036 256 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 TSPO2Q5TGU0 170 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 WIPF2Q8TF74 440 aaPredicted RBP7.38□□□□□ -1.23
COMMD3-215ENST00000602574 MCHR1Q99705 422 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 SAP30LQ9HAJ7 183 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 TAAR2Q9P1P5 351 aa7.38□□□□□ -1.23
COMMD3-215ENST00000602574 KIAA2026Q5HYC2 2103 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 CTXND1A0A1B0GTU2 59 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 A1L4Q6 167 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 NPIPB13A6NJU9 1138 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 NPIPB4C9JG80 1138 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 ZG16O60844 167 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 SCTP09683 121 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 JMJD7P0C870 316 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 EGR1P18146 543 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 PI3P19957 117 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 QRFPP83859 136 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 C3AR1Q16581 482 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 TEX45Q8NA69 505 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 DCAF4L2Q8NA75 395 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 OR1L8Q8NGR8 309 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 OR51H1Q8NH63 302 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 PRSS27Q9BQR3 290 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 CLDND1Q9NY35 253 aa7.37□□□□□ -1.23
COMMD3-215ENST00000602574 TECRQ9NZ01 308 aaKnown RBP7.37□□□□□ -1.23
COMMD3-215ENST00000602574 TRAV24A0A0B4J272 114 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 A0A0D9SEW6 157 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 A0A1B0GWB2 263 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 TNFSF11O14788 317 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 DNPH1O43598 174 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 NEURL1O76050 574 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 CRYAAP02489 173 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 RPS24P62847 133 aaKnown RBP7.36□□□□□ -1.23
COMMD3-215ENST00000602574 C6orf226Q5I0X4 101 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 LINC01545Q5VT33 79 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 GAPTQ8N292 157 aa7.36□□□□□ -1.23
COMMD3-215ENST00000602574 CHCHD1Q96BP2 118 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms