RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 SPIN2AQ99865 258 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 SPIN2BQ9BPZ2 258 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 AIFM2Q9BRQ8 373 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 RTBDNQ9BSG5 229 aaPredicted RBP4.09□□□□□ -1.75
VRK3-226ENST00000602029 NICN1Q9BSH3 213 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 RSRP1Q9BUV0 290 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 HIPK2Q9H2X6 1198 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 KCNK15Q9H427 330 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 C12orf4Q9NQ89 552 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 ZC4H2Q9NQZ6 224 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 PARP11Q9NR21 331 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 PLEKHJ1Q9NW61 149 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 IDI2-AS1Q9NZ38 188 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 EHFQ9NZC4 300 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 NSG2Q9Y328 171 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 TMED3Q9Y3Q3 217 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 TRBV6-6A0A0A6YYG2 114 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 BORCS7-ASMTA0A0B4J1R7 106 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 J3QR06 171 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 SLC33A1O00400 549 aaPredicted RBP4.08□□□□□ -1.76
VRK3-226ENST00000602029 SDCBPO00560 298 aaPredicted RBP4.08□□□□□ -1.76
VRK3-226ENST00000602029 PDCD6O75340 191 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 DEDDO75618 318 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 ATG12O94817 140 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 SCAF4O95104 1147 aaKnown RBP4.08□□□□□ -1.76
VRK3-226ENST00000602029 HTR3BO95264 441 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 PMP2P02689 132 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 AMY1AP04745 511 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 FCGR3AP08637 254 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 OR8U8P0C7N1 319 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 SEC11BP0C7V7 166 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 SLC25A6P12236 298 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 PGAM2P15259 253 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 SERPINA2P20848 420 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 CHATP28329 748 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 S100GP29377 79 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 SSTR5P35346 364 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 GPR12P47775 334 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 P2RY1P47900 373 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 SULT1A2P50226 295 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 FLI1Q01543 452 aaPredicted RBP4.08□□□□□ -1.76
VRK3-226ENST00000602029 KIR2DS1Q14954 304 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 PLGLAQ15195 96 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 SLC22A6Q4U2R8 563 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 MOB1BQ7L9L4 216 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 THNSL2Q86YJ6 484 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 LGI3Q8N145 548 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 PRR18Q8N4B5 295 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 LFNGQ8NES3 379 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 OR13A1Q8NGR1 328 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 OR1N2Q8NGR9 330 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 OR2T10Q8NGZ9 312 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 LYPD6BQ8NI32 183 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 UBALD1Q8TB05 177 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 MOB3AQ96BX8 217 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 KIRREL1Q96J84 757 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 LINC00052Q96N35 136 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 P2RX4Q99571 388 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 CMSS1Q9BQ75 279 aaKnown RBP4.08□□□□□ -1.76
VRK3-226ENST00000602029 ARV1Q9H2C2 271 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 IFT22Q9H7X7 185 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 FAM212BQ9NTI7 297 aaPredicted RBP4.08□□□□□ -1.76
VRK3-226ENST00000602029 GNG12Q9UBI6 72 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 PSG11Q9UQ72 335 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 STRAPQ9Y3F4 350 aaKnown RBP4.08□□□□□ -1.76
VRK3-226ENST00000602029 STAB2Q8WWQ8 2551 aa4.08□□□□□ -1.76
VRK3-226ENST00000602029 IGHV3-43A0A0B4J1X8 118 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 IGHV1-3A0A0C4DH29 117 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 A0A1B0GW64 132 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 A0A1W2PPI3 338 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 TMEM218A2RU14 115 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 LINC01548A6NM66 108 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 FAM25EA8MYX2 175 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 UMAD1C9J7I0 102 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 NPIPB11E5RHQ5 1161 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 K7EPK0 472 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 OVOL1O14753 267 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 NDUFS6O75380 124 aaKnown RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 MOSP00540 346 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 IGLV1-47P01700 117 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 ELANEP08246 267 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 FRMD6-AS1P0C7T7 363 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 OR5H8P0DN80 308 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 IGHV3-43DP0DP04 118 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 PVALBP20472 110 aaPredicted RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 FUT3P21217 361 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 CAV2P51636 162 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 RBM11P57052 281 aaKnown RBP4.07□□□□□ -1.76
VRK3-226ENST00000602029 HERV-K104P61576 105 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 BAXQ07812 192 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 ZNF616Q08AN1 781 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 PJVKQ0ZLH3 352 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 FOXE3Q13461 319 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 DIAPH2-AS1Q14236 149 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 ZNF266Q14584 549 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 ZNF146Q15072 292 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 MMDQ15546 238 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 MSMO1Q15800 293 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 ECSCRQ19T08 205 aa4.07□□□□□ -1.76
VRK3-226ENST00000602029 C17orf58Q2M2W7 97 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms