RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 DMRT1Q9Y5R6 373 aa13.42□□□□□ -0.26
IRF3-230ENST00000601809 C13orf42A0A1B0GVH6 325 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 CTDSPLO15194 276 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 AREGP15514 252 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 CTRB1P17538 263 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 TBPP20226 339 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 PTBP1P26599 531 aaKnown RBP eCLIP13.41□□□□□ -0.26
IRF3-230ENST00000601809 INSL3P51460 131 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 TSPAN5P62079 268 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 CTRB2Q6GPI1 263 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 CMTM1Q8IZ96 169 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 ARRDC1Q8N5I2 433 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 TMEM229BQ8NBD8 167 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 SMIM4Q8WVI0 70 aa13.41□□□□□ -0.26
IRF3-230ENST00000601809 RANGRFQ9HD47 186 aaPredicted RBP13.41□□□□□ -0.26
IRF3-230ENST00000601809 IGLC7A0M8Q6 106 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 FAM223BA6NKX1 122 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 MARCH11A6NNE9 402 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 RGS5O15539 181 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 IGKV1-39P01597 117 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 IGKV1D-39P04432 117 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 LPAR6P43657 344 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 RND3P61587 244 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 MRPS10P82664 201 aaKnown RBP13.4□□□□□ -0.26
IRF3-230ENST00000601809 RHOGP84095 191 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 SSBP1Q04837 148 aaKnown RBP13.4□□□□□ -0.26
IRF3-230ENST00000601809 KLF5Q13887 457 aaPredicted RBP13.4□□□□□ -0.26
IRF3-230ENST00000601809 PHLDA2Q53GA4 152 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 RNASE10Q5GAN6 216 aaKnown RBP13.4□□□□□ -0.26
IRF3-230ENST00000601809 LPCAT3Q6P1A2 487 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 FAM223AQ8IWN6 122 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 SLC38A6Q8IZM9 456 aa13.4□□□□□ -0.26
IRF3-230ENST00000601809 MPPED1O15442 326 aa13.39□□□□□ -0.27
IRF3-230ENST00000601809 PSMB6P28072 239 aa13.39□□□□□ -0.27
IRF3-230ENST00000601809 IL34Q6ZMJ4 242 aa13.39□□□□□ -0.27
IRF3-230ENST00000601809 TBC1D26Q86UD7 250 aa13.39□□□□□ -0.27
IRF3-230ENST00000601809 ZNF429Q86V71 674 aa13.39□□□□□ -0.27
IRF3-230ENST00000601809 SLC25A42Q86VD7 318 aa13.39□□□□□ -0.27
IRF3-230ENST00000601809 FYTTD1Q96QD9 318 aaKnown RBP13.39□□□□□ -0.27
IRF3-230ENST00000601809 HRASLSQ9HDD0 168 aa13.39□□□□□ -0.27
IRF3-230ENST00000601809 PEF1Q9UBV8 284 aaKnown RBP13.39□□□□□ -0.27
IRF3-230ENST00000601809 LSM4Q9Y4Z0 139 aaKnown RBP13.39□□□□□ -0.27
IRF3-230ENST00000601809 ANKRD34BA5PLL1 514 aa13.38□□□□□ -0.27
IRF3-230ENST00000601809 RPA2P15927 270 aa13.38□□□□□ -0.27
IRF3-230ENST00000601809 NECAP1Q8NC96 275 aa13.38□□□□□ -0.27
IRF3-230ENST00000601809 DIRAS2Q96HU8 199 aa13.38□□□□□ -0.27
IRF3-230ENST00000601809 SEC22AQ96IW7 307 aa13.38□□□□□ -0.27
IRF3-230ENST00000601809 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
IRF3-230ENST00000601809 ZMAT5Q9UDW3 170 aaKnown RBP13.38□□□□□ -0.27
IRF3-230ENST00000601809 IGLV11-55A0A075B6I3 123 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.37□□□□□ -0.27
IRF3-230ENST00000601809 TEX50A0A1B0GTY4 177 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 BMPR1BO00238 502 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 GSTZ1O43708 216 aaPredicted RBP13.37□□□□□ -0.27
IRF3-230ENST00000601809 OR2J3O76001 311 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 ZP3P21754 424 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 TNFSF8P32971 234 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 G6PCP35575 357 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 TAS2R19P59542 299 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 EXOSC2Q13868 293 aaKnown RBP13.37□□□□□ -0.27
IRF3-230ENST00000601809 STEAP1BQ6NZ63 245 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 DMBX1Q8NFW5 382 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 ZNF486Q96H40 463 aaPredicted RBP13.37□□□□□ -0.27
IRF3-230ENST00000601809 RABL2AQ9UBK7 228 aaPredicted RBP13.37□□□□□ -0.27
IRF3-230ENST00000601809 RABL2BQ9UNT1 228 aa13.37□□□□□ -0.27
IRF3-230ENST00000601809 SORL1Q92673 2214 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 DBX1A6NMT0 343 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 NDUFB8O95169 186 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 RAB3DO95716 219 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 KRASP01116 189 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 P0C879 139 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 ATP5G2Q06055 141 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 C15orf32Q32M92 178 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 OR10W1Q8NGF6 305 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 TERB2Q8NHR7 220 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 CCDC140Q96MF4 163 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 PRR25Q96S07 402 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 C6orf62Q9GZU0 229 aaPredicted RBP13.36□□□□□ -0.27
IRF3-230ENST00000601809 NDUFA4L2Q9NRX3 87 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 TMEM14BQ9NUH8 114 aa13.36□□□□□ -0.27
IRF3-230ENST00000601809 SAP30O75446 220 aa13.35□□□□□ -0.27
IRF3-230ENST00000601809 IFNA6P05013 189 aa13.35□□□□□ -0.27
IRF3-230ENST00000601809 REG1AP05451 166 aa13.35□□□□□ -0.27
IRF3-230ENST00000601809 PI3P19957 117 aa13.35□□□□□ -0.27
IRF3-230ENST00000601809 ECI1P42126 302 aa13.35□□□□□ -0.27
IRF3-230ENST00000601809 WT1-ASQ06250 92 aa13.35□□□□□ -0.27
IRF3-230ENST00000601809 FAAP20Q6NZ36 180 aa13.35□□□□□ -0.27
IRF3-230ENST00000601809 QTRT1Q9BXR0 403 aaKnown RBP13.35□□□□□ -0.27
IRF3-230ENST00000601809 COMMD5Q9GZQ3 224 aa13.35□□□□□ -0.27
IRF3-230ENST00000601809 ZNF256Q9Y2P7 627 aaPredicted RBP13.35□□□□□ -0.27
IRF3-230ENST00000601809 NSG2Q9Y328 171 aa13.35□□□□□ -0.27
IRF3-230ENST00000601809 HUWE1Q7Z6Z7 4374 aaKnown RBP13.35□□□□□ -0.27
IRF3-230ENST00000601809 NOL3O60936 208 aaKnown RBP13.34□□□□□ -0.27
IRF3-230ENST00000601809 IGLV1-51P01701 117 aa13.34□□□□□ -0.27
IRF3-230ENST00000601809 ERVK-16P61578 105 aa13.34□□□□□ -0.27
IRF3-230ENST00000601809 IL18Q14116 193 aa13.34□□□□□ -0.27
IRF3-230ENST00000601809 THOC7Q6I9Y2 204 aaKnown RBP13.34□□□□□ -0.27
IRF3-230ENST00000601809 OR4C16Q8NGL9 310 aa13.34□□□□□ -0.27
IRF3-230ENST00000601809 OR13C8Q8NGS7 320 aa13.34□□□□□ -0.27
IRF3-230ENST00000601809 MCFD2Q8NI22 146 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms