RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	KLK9	Q2XQG4	91 aa		11.85	□□□□□ -0.51
PLD3-223	ENST00000600948	ZNF585B	Q52M93	769 aa		11.85	□□□□□ -0.51
PLD3-223	ENST00000600948	PHLDA2	Q53GA4	152 aa		11.85	□□□□□ -0.51
PLD3-223	ENST00000600948	NECAP1	Q8NC96	275 aa		11.85	□□□□□ -0.51
PLD3-223	ENST00000600948	DGCR14	Q96DF8	476 aa	Known RBP	11.85	□□□□□ -0.51
PLD3-223	ENST00000600948	OR4C12	Q96R67	309 aa		11.85	□□□□□ -0.51
PLD3-223	ENST00000600948	BCL7B	Q9BQE9	202 aa		11.85	□□□□□ -0.51
PLD3-223	ENST00000600948	RSRP1	Q9BUV0	290 aa		11.85	□□□□□ -0.51
PLD3-223	ENST00000600948	MTFP1	Q9UDX5	166 aa		11.85	□□□□□ -0.51
PLD3-223	ENST00000600948	KLK9	Q9UKQ9	250 aa		11.85	□□□□□ -0.51
PLD3-223	ENST00000600948	DPPA5	A6NC42	116 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	MARCH11	A6NNE9	402 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	CTDSP2	O14595	271 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	LY86	O95711	162 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	FGF2	P09038	288 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	RPA2	P15927	270 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	CTRB1	P17538	263 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	LPAR6	P43657	344 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	CTRB2	Q6GPI1	263 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	LPCAT3	Q6P1A2	487 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	LAX1	Q8IWV1	398 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	DMBX1	Q8NFW5	382 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	OR6Q1	Q8NGQ2	317 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	DYNC2LI1	Q8TCX1	351 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	FCAMR	Q8WWV6	532 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	FANCD2OS	Q96PS1	177 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	ELOVL1	Q9BW60	279 aa		11.84	□□□□□ -0.51
PLD3-223	ENST00000600948	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	IGLC7	A0M8Q6	106 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	BMPR1B	O00238	502 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	RGS5	O15539	181 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	CD3D	P04234	171 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	REG1A	P05451	166 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	SPN	P16150	400 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	RPL5	P46777	297 aa	Known RBP	11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	SYNJ2BP	P57105	145 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	ERVK-16	P61578	105 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	CD69	Q07108	199 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	C15orf32	Q32M92	178 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	IL34	Q6ZMJ4	242 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	HAPLN4	Q86UW8	402 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	LHFPL1	Q86WI0	220 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	CADM3	Q8N126	398 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	OR9G4	Q8NGQ1	327 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	C15orf40	Q8WUR7	153 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	CCDC59	Q9P031	241 aa	Known RBP	11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	FBXL7	Q9UJT9	491 aa		11.83	□□□□□ -0.52
PLD3-223	ENST00000600948	NDUFB8	O95169	186 aa		11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	KRAS	P01116	189 aa		11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	IGLV1-51	P01701	117 aa		11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	TBP	P20226	339 aa		11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	RPEL1	Q2QD12	228 aa		11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	RNASE10	Q5GAN6	216 aa	Known RBP	11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	TBC1D26	Q86UD7	250 aa		11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	SLC38A6	Q8IZM9	456 aa		11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	SRSF8	Q9BRL6	282 aa	Known RBP	11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	COMMD5	Q9GZQ3	224 aa		11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	DMRT1	Q9Y5R6	373 aa		11.82	□□□□□ -0.52
PLD3-223	ENST00000600948	IGLV11-55	A0A075B6I3	123 aa		11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	GABARAP	H6UMI1	98 aa		11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	DHFR	P00374	187 aa		11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	IFNA6	P05013	189 aa		11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	GP9	P14770	177 aa		11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	S100G	P29377	79 aa		11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	G6PC	P35575	357 aa		11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	C11orf87	Q6NUJ2	197 aa		11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	ARRDC1	Q8N5I2	433 aa		11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	TMEM229B	Q8NBD8	167 aa		11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	QTRT1	Q9BXR0	403 aa	Known RBP	11.81	□□□□□ -0.52
PLD3-223	ENST00000600948	TEX50	A0A1B0GTY4	177 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948		H3BMQ9	156 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	IGKV1-39	P01597	117 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	CD74	P04233	296 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	IGKV1D-39	P04432	117 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	CSN3	P07498	182 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	HIST1H1B	P16401	226 aa	Known RBP	11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	RND3	P61587	244 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	TATDN3	Q17R31	274 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	FAM209B	Q5JX69	171 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	THOC7	Q6I9Y2	204 aa	Known RBP	11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	OR10W1	Q8NGF6	305 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	OR4D10	Q8NGI6	311 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	OR1L8	Q8NGR8	309 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	ISOC1	Q96CN7	298 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	CCDC140	Q96MF4	163 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	NSG2	Q9Y328	171 aa		11.8	□□□□□ -0.52
PLD3-223	ENST00000600948	PPP5D1	E7EU14	171 aa		11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	NOL3	O60936	208 aa	Known RBP	11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	TRAPPC2	P0DI81	140 aa		11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	TRAPPC2B	P0DI82	140 aa		11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	DEFA4	P12838	97 aa		11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	PGAM2	P15259	253 aa		11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	PTBP1	P26599	531 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	TAS2R19	P59542	299 aa		11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	MRPS10	P82664	201 aa	Known RBP	11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	SSBP1	Q04837	148 aa	Known RBP	11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	SMIM4	Q8WVI0	70 aa		11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	ZNF486	Q96H40	463 aa	Predicted RBP	11.79	□□□□□ -0.52
PLD3-223	ENST00000600948	SEC22A	Q96IW7	307 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms