RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 CDS2O95674 445 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 HPRT1P00492 218 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 SLC25A4P12235 298 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 S100A11P31949 105 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 LPAR6P43657 344 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 OR2F1Q13607 317 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 HNF4GQ14541 408 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 TMEM187Q14656 261 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 OPCMLQ14982 345 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 SP6Q3SY56 376 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 LGALSLQ3ZCW2 172 aaPredicted RBP6.89□□□□□ -1.31
TRIM28-214ENST00000600840 TMEM128Q5BJH2 165 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 LYG2Q86SG7 212 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 PUSL1Q8N0Z8 303 aaKnown RBP6.89□□□□□ -1.31
TRIM28-214ENST00000600840 C5orf56Q8N8D9 126 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 LRTM2Q8N967 370 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 OR5M8Q8NGP6 311 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 OR51H1Q8NH63 302 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 OSR1Q8TAX0 266 aaPredicted RBP6.89□□□□□ -1.31
TRIM28-214ENST00000600840 TCTEX1D2Q8WW35 142 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 FLYWCH2Q96CP2 140 aaKnown RBP6.89□□□□□ -1.31
TRIM28-214ENST00000600840 SEC22AQ96IW7 307 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 TMEM56Q96MV1 263 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 WWC2-AS2Q96NR7 200 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 PRSS22Q9GZN4 317 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 NAA60Q9H7X0 242 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 PLEKHA2Q9HB19 425 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 PRELID3BQ9Y3B1 194 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 TMEM56-RWDD3S4R434 201 aa6.89□□□□□ -1.31
TRIM28-214ENST00000600840 PIGBOS1A0A0B4J2F0 54 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 A0A1W2PRX2 142 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 C9orf170A2RU37 121 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 LINC01548A6NM66 108 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 SMLR1H3BR10 107 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 FGF16O43320 207 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 B3GALNT1O75752 331 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 S1PR2O95136 353 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 SFT2D2O95562 160 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 DUS4LO95620 317 aaKnown RBP6.88□□□□□ -1.31
TRIM28-214ENST00000600840 IGKV1-5P01602 117 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 APOA2P02652 100 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 OR5AC1P0C628 307 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 TMEM11P17152 192 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 KIR2DS2P43631 304 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 ARHGDIBP52566 201 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 CATR1Q13166 79 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 PPP1R1AQ13522 171 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 ANKRD55Q3KP44 614 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 OR2B11Q5JQS5 317 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 C16orf82Q7Z2V1 217 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 SLC51BQ86UW2 128 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 NDUFA11Q86Y39 141 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 SELENOHQ8IZQ5 122 aaKnown RBP6.88□□□□□ -1.31
TRIM28-214ENST00000600840 OR5AU1Q8NGC0 362 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 OR11H4Q8NGC9 324 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 LRRC20Q8TCA0 184 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 CD300LFQ8TDQ1 290 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 MITD1Q8WV92 249 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 R3HDM4Q96D70 268 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 PHYHIPLQ96FC7 376 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 SLC25A33Q9BSK2 321 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 TMEM222Q9H0R3 208 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 PITPNC1Q9UKF7 332 aa6.88□□□□□ -1.31
TRIM28-214ENST00000600840 C14orf166Q9Y224 244 aaKnown RBP6.88□□□□□ -1.31
TRIM28-214ENST00000600840 A0A0G2JRQ6 117 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 G3V3Q6 166 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 H7C2Y5 167 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 K7EIL1 84 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 GOSR2O14653 212 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 RRHO14718 337 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 NBR2O15453 112 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 TSC22D2O75157 780 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 SPDEFO95238 335 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 CRYZL1O95825 349 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 HLA-AP01891 365 aaKnown RBP6.87□□□□□ -1.31
TRIM28-214ENST00000600840 PET100P0DJ07 73 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 EGR2P11161 476 aaPredicted RBP6.87□□□□□ -1.31
TRIM28-214ENST00000600840 AKR1C4P17516 323 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 VDAC2P45880 294 aaPredicted RBP6.87□□□□□ -1.31
TRIM28-214ENST00000600840 UBE2KP61086 200 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 RPS16P62249 146 aaKnown RBP6.87□□□□□ -1.31
TRIM28-214ENST00000600840 PJVKQ0ZLH3 352 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 DHRS2Q13268 280 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 EXOSC2Q13868 293 aaKnown RBP6.87□□□□□ -1.31
TRIM28-214ENST00000600840 RTL8BQ17RB0 113 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 C5orf64Q2M2E5 130 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 ABCA11PQ4W5N1 156 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 Q6ZRM9 215 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 VKORC1L1Q8N0U8 176 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 CCDC71LQ8N9Z2 235 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 TEX45Q8NA69 505 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 OR4S2Q8NH73 311 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 COQ8AQ8NI60 647 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 TMEM167AQ8TBQ9 72 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 SCARB1Q8WTV0 552 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 RHOVQ96L33 236 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 TPSG1Q9NRR2 321 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 PRR13Q9NZ81 148 aa6.87□□□□□ -1.31
TRIM28-214ENST00000600840 BIRC6Q9NR09 4857 aa6.86□□□□□ -1.31
TRIM28-214ENST00000600840 IGHV7-81A0A0B4J1V7 117 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms