RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 C13orf42A0A1B0GVH6 325 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 ANKRD20A5PA0PJZ0 165 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 CD3DP04234 171 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 FCGR2CP31995 323 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 OR3A3P47888 321 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 TAS2R19P59542 299 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 DEFB114Q30KQ6 69 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 ZNF833PQ6ZTB9 187 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 S100ZQ8WXG8 99 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 FBXL15Q9H469 300 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 ZC4H2Q9NQZ6 224 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 EHFQ9NZC4 300 aa13.13□□□□□ -0.31
SSBP4-207ENST00000600244 IGKV1D-13A0A0B4J2D9 117 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 SPRY2O43597 315 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 TRBV12-3P01733 135 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 ZNF735P0CB33 412 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 IGKV1-13P0DP09 117 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 AADACP22760 399 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 BAK1Q16611 211 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 FAM71F2Q6NXP2 309 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 STEAP1BQ6NZ63 245 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 Q6ZWC4 215 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 ABHD5Q8WTS1 349 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 ABHD14BQ96IU4 210 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 TINAGL1Q9GZM7 467 aaPredicted RBP13.12□□□□□ -0.31
SSBP4-207ENST00000600244 PIPOXQ9P0Z9 390 aa13.12□□□□□ -0.31
SSBP4-207ENST00000600244 PEF1Q9UBV8 284 aaKnown RBP13.12□□□□□ -0.31
SSBP4-207ENST00000600244 SAA2-SAA4A0A096LPE2 208 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 A0A0G2JLM5 398 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 M0QYG6 137 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 RRHO14718 337 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 RAB29O14966 203 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 RTL8CO15255 209 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 PPYP01298 95 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 IGLV2-14P01704 120 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 SAA2P0DJI9 122 aaPredicted RBP13.11□□□□□ -0.31
SSBP4-207ENST00000600244 TCTAP57738 103 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 KLF9Q13886 244 aaPredicted RBP13.11□□□□□ -0.31
SSBP4-207ENST00000600244 ZNF343Q6P1L6 599 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 LHFPL1Q86WI0 220 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 TMEM217Q8N7C4 229 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.11□□□□□ -0.31
SSBP4-207ENST00000600244 OR4D10Q8NGI6 311 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 C5orf30Q96GV9 206 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 MRPL20Q9BYC9 149 aaKnown RBP13.11□□□□□ -0.31
SSBP4-207ENST00000600244 PEMTQ9UBM1 199 aa13.11□□□□□ -0.31
SSBP4-207ENST00000600244 H3BUA1 57 aa13.1□□□□□ -0.31
SSBP4-207ENST00000600244 RAB3DO95716 219 aa13.1□□□□□ -0.31
SSBP4-207ENST00000600244 GUCA2BQ16661 112 aa13.1□□□□□ -0.31
SSBP4-207ENST00000600244 RNASE10Q5GAN6 216 aaKnown RBP13.1□□□□□ -0.31
SSBP4-207ENST00000600244 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
SSBP4-207ENST00000600244 ARRDC1Q8N5I2 433 aa13.1□□□□□ -0.31
SSBP4-207ENST00000600244 POC5Q8NA72 575 aa13.1□□□□□ -0.31
SSBP4-207ENST00000600244 MOB3AQ96BX8 217 aa13.1□□□□□ -0.31
SSBP4-207ENST00000600244 AKAIN1P0CW23 69 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 KIR2DS2P43631 304 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 PPP5CP53041 499 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 EIF4EBP1Q13541 118 aaPredicted RBP13.09□□□□□ -0.31
SSBP4-207ENST00000600244 MSMO1Q15800 293 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 RPEL1Q2QD12 228 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 RPL39P5Q59GN2 51 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 AADACL3Q5VUY0 350 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 ZNF562Q6V9R5 426 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 OR4C16Q8NGL9 310 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 OR6F1Q8NGZ6 308 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 DEDD2Q8WXF8 326 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 RNF183Q96D59 192 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 WDR89Q96FK6 387 aaPredicted RBP13.09□□□□□ -0.31
SSBP4-207ENST00000600244 ZNF2Q9BSG1 426 aaPredicted RBP13.09□□□□□ -0.31
SSBP4-207ENST00000600244 OR2D2Q9H210 308 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 SDHAF2Q9NX18 166 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 ZNF221Q9UK13 617 aa13.09□□□□□ -0.31
SSBP4-207ENST00000600244 IL7P13232 177 aa13.08□□□□□ -0.32
SSBP4-207ENST00000600244 MEF2DQ14814 521 aa13.08□□□□□ -0.32
SSBP4-207ENST00000600244 SLC16A13Q7RTY0 426 aa13.08□□□□□ -0.32
SSBP4-207ENST00000600244 ZNF645Q8N7E2 425 aa13.08□□□□□ -0.32
SSBP4-207ENST00000600244 CCDC32Q9BV29 185 aa13.08□□□□□ -0.32
SSBP4-207ENST00000600244 FXYD6Q9H0Q3 95 aa13.08□□□□□ -0.32
SSBP4-207ENST00000600244 ZNF355PQ9NSJ1 428 aa13.08□□□□□ -0.32
SSBP4-207ENST00000600244 APLNQ9ULZ1 77 aa13.08□□□□□ -0.32
SSBP4-207ENST00000600244 OR5H14A6NHG9 310 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 SLC22A5O76082 557 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 CT45A6P0DMU7 189 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 CT45A5P0DMU8 189 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 CT45A7P0DMV0 189 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 UCP3P55916 312 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 TSPAN5P62079 268 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 ZNF846Q147U1 533 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 DEFB135Q30KP9 77 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 FAAP20Q6NZ36 180 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 TOMM5Q8N4H5 51 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 MRGPRFQ96AM1 343 aa13.07□□□□□ -0.32
SSBP4-207ENST00000600244 WDR12Q9GZL7 423 aaKnown RBP13.07□□□□□ -0.32
SSBP4-207ENST00000600244 J3QRK9 145 aa13.06□□□□□ -0.32
SSBP4-207ENST00000600244 GNRHRP30968 328 aa13.06□□□□□ -0.32
SSBP4-207ENST00000600244 AP3S2P59780 193 aa13.06□□□□□ -0.32
SSBP4-207ENST00000600244 PLGLAQ15195 96 aa13.06□□□□□ -0.32
SSBP4-207ENST00000600244 OR5T1Q8NG75 326 aa13.06□□□□□ -0.32
SSBP4-207ENST00000600244 DYNLRB2Q8TF09 96 aa13.06□□□□□ -0.32
SSBP4-207ENST00000600244 C2CD4CQ8TF44 421 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms