RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 CHRNA7P36544 502 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 RPL27AP46776 148 aaKnown RBP15.88■□□□□ 0.13
PNKP-211ENST00000598020 CCR6P51684 374 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 RPL23AP62750 156 aaKnown RBP15.88■□□□□ 0.13
PNKP-211ENST00000598020 SP6Q3SY56 376 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 PRR31Q5SQ13 230 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 C10orf55Q5SWW7 151 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 HIST2H2BDQ6DRA6 164 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 TSC22D3Q99576 134 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 H3BUA1 57 aa15.87■□□□□ 0.13
PNKP-211ENST00000598020 LYRM1O43325 122 aa15.87■□□□□ 0.13
PNKP-211ENST00000598020 P0C879 139 aa15.87■□□□□ 0.13
PNKP-211ENST00000598020 SLC6A1P30531 599 aa15.87■□□□□ 0.13
PNKP-211ENST00000598020 SUPT4H1P63272 117 aaKnown RBP15.87■□□□□ 0.13
PNKP-211ENST00000598020 TMEM128Q5BJH2 165 aa15.87■□□□□ 0.13
PNKP-211ENST00000598020 TMEM56Q96MV1 263 aa15.87■□□□□ 0.13
PNKP-211ENST00000598020 PHB2Q99623 299 aa15.87■□□□□ 0.13
PNKP-211ENST00000598020 TMEM56-RWDD3S4R434 201 aa15.87■□□□□ 0.13
PNKP-211ENST00000598020 TEX22C9J3V5 150 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 SNAPC5O75971 98 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 IGKV1-5P01602 117 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 RPLP1P05386 114 aaKnown RBP15.86■□□□□ 0.13
PNKP-211ENST00000598020 OR9G9P0C7N8 305 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 AKR1C4P17516 323 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 CDX1P47902 265 aaPredicted RBP15.86■□□□□ 0.13
PNKP-211ENST00000598020 RAB9AP51151 201 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 KIAA0141Q14154 515 aaPredicted RBP15.86■□□□□ 0.13
PNKP-211ENST00000598020 TRIM16LQ309B1 348 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 H2BFWTQ7Z2G1 175 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 SRSF8Q9BRL6 282 aaKnown RBP15.86■□□□□ 0.13
PNKP-211ENST00000598020 COMMD5Q9GZQ3 224 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 KLK15Q9H2R5 256 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 PRNDQ9UKY0 176 aa15.86■□□□□ 0.13
PNKP-211ENST00000598020 A0A1B0GW64 132 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 E7EUB6 86 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 UPK1BO75841 260 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 PF4V1P10720 104 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 OR2B8PP59922 312 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 UBE2MP61081 183 aaKnown RBP15.85■□□□□ 0.13
PNKP-211ENST00000598020 TMEM187Q14656 261 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 NSUN5P1Q3KNT7 163 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 THOC7Q6I9Y2 204 aaKnown RBP15.85■□□□□ 0.13
PNKP-211ENST00000598020 TMEM65Q6PI78 240 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 TMED4Q7Z7H5 227 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 SLC25A42Q86VD7 318 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 TTC9CQ8N5M4 171 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 FAM110DQ8TAY7 271 aaPredicted RBP15.85■□□□□ 0.13
PNKP-211ENST00000598020 RBPMSQ93062 196 aaKnown RBP15.85■□□□□ 0.13
PNKP-211ENST00000598020 IL22RA2Q969J5 263 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 SLA2Q9H6Q3 261 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 TMEM14BQ9NUH8 114 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 FKBP11Q9NYL4 201 aa15.85■□□□□ 0.13
PNKP-211ENST00000598020 CGB1A6NKQ9 187 aa15.84■□□□□ 0.13
PNKP-211ENST00000598020 ANXA3P12429 323 aa15.84■□□□□ 0.13
PNKP-211ENST00000598020 LCNL1Q6ZST4 164 aa15.84■□□□□ 0.13
PNKP-211ENST00000598020 SELENOHQ8IZQ5 122 aaKnown RBP15.84■□□□□ 0.13
PNKP-211ENST00000598020 CENPSQ8N2Z9 138 aa15.84■□□□□ 0.13
PNKP-211ENST00000598020 OR5T1Q8NG75 326 aa15.84■□□□□ 0.13
PNKP-211ENST00000598020 OR4F17Q8NGA8 305 aa15.84■□□□□ 0.13
PNKP-211ENST00000598020 LHFPL5Q8TAF8 219 aa15.84■□□□□ 0.13
PNKP-211ENST00000598020 UBE2E2Q96LR5 201 aa15.84■□□□□ 0.13
PNKP-211ENST00000598020 OR4F4Q96R69 305 aa15.84■□□□□ 0.13
PNKP-211ENST00000598020 TEX50A0A1B0GTY4 177 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 C15orf61A6NNL5 157 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 MYOD1P15172 320 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 AKR1C2P52895 323 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 ASAH1Q13510 395 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 KHDC1LQ5JSQ8 128 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 ZNF695Q8IW36 515 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 FAM219AQ8IW50 185 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 ZNF491Q8N8L2 437 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 OR1L8Q8NGR8 309 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 OR5B3Q8NH48 314 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 FYTTD1Q96QD9 318 aaKnown RBP15.83■□□□□ 0.12
PNKP-211ENST00000598020 QTRT1Q9BXR0 403 aaKnown RBP15.83■□□□□ 0.12
PNKP-211ENST00000598020 TBC1D24Q9ULP9 559 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 ZNF257Q9Y2Q1 563 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 NSG2Q9Y328 171 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 TRRAPQ9Y4A5 3859 aa15.83■□□□□ 0.12
PNKP-211ENST00000598020 PIGBOS1A0A0B4J2F0 54 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 A0A1W2PRX2 142 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 HMX3A6NHT5 357 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 NPIPB5A8MRT5 1133 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 TSPAN15O95858 294 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 CRYGCP07315 174 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 SRPXP78539 464 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 HSD17B13Q7Z5P4 300 aaPredicted RBP15.82■□□□□ 0.12
PNKP-211ENST00000598020 ZNF429Q86V71 674 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 OR4A16Q8NH70 328 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 LSM10Q969L4 123 aaKnown RBP15.82■□□□□ 0.12
PNKP-211ENST00000598020 RRNAD1Q96FB5 475 aaKnown RBP15.82■□□□□ 0.12
PNKP-211ENST00000598020 NDUFA4L2Q9NRX3 87 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 OR51B2Q9Y5P1 312 aa15.82■□□□□ 0.12
PNKP-211ENST00000598020 DBX1A6NMT0 343 aa15.81■□□□□ 0.12
PNKP-211ENST00000598020 SFT2D2O95562 160 aa15.81■□□□□ 0.12
PNKP-211ENST00000598020 TRAPPC2P0DI81 140 aa15.81■□□□□ 0.12
PNKP-211ENST00000598020 TRAPPC2BP0DI82 140 aa15.81■□□□□ 0.12
PNKP-211ENST00000598020 APELAP0DMC3 54 aa15.81■□□□□ 0.12
PNKP-211ENST00000598020 IFITM3Q01628 133 aa15.81■□□□□ 0.12
PNKP-211ENST00000598020 KLK9Q2XQG4 91 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms