RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 NEUROG1Q92886 237 aa18.58■□□□□ 0.56
SRRM1-222ENST00000596378 GGTLC1Q9BX51 225 aa18.58■□□□□ 0.56
SRRM1-222ENST00000596378 SRRM4A7MD48 611 aaKnown RBP18.57■□□□□ 0.56
SRRM1-222ENST00000596378 HSPE1P61604 102 aaKnown RBP18.57■□□□□ 0.56
SRRM1-222ENST00000596378 TMEM241Q24JQ0 296 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 ARSJQ5FYB0 599 aaPredicted RBP18.57■□□□□ 0.56
SRRM1-222ENST00000596378 WFIKKN1Q96NZ8 548 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 SCNM1Q9BWG6 230 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 SEC14L6B5MCN3 397 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 LY86O95711 162 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 RPL31P62899 125 aaKnown RBP18.57■□□□□ 0.56
SRRM1-222ENST00000596378 SLC24A4Q8NFF2 622 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 OR13D1Q8NGV5 346 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 SSUH2Q9Y2M2 353 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 ZNF835Q9Y2P0 537 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 LINC00312Q9Y6C7 94 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 PXMP4Q9Y6I8 212 aa18.57■□□□□ 0.56
SRRM1-222ENST00000596378 TMEM250H0YL14 139 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 CA2P00918 260 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 ADTRPQ96IZ2 230 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 OR51B2Q9Y5P1 312 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 TRGC2P03986 189 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 NPY1RP25929 384 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 RND2P52198 227 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 RPL23P62829 140 aaKnown RBP18.56■□□□□ 0.56
SRRM1-222ENST00000596378 LYPD2Q6UXB3 125 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 OR51G1Q8NGK1 321 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 FAM210BQ96KR6 192 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 SLC35D1Q9NTN3 355 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 TMEM242Q9NWH2 141 aa18.56■□□□□ 0.56
SRRM1-222ENST00000596378 A0A1W2PPV4 95 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 C11orf94C9JXX5 98 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 NPPCP23582 126 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 OPRK1P41145 380 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 TMPRSS3P57727 454 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 C1orf87Q8N0U7 546 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 GGACTQ9BVM4 153 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 MPDU1O75352 247 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 HRASP01112 189 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 FAM87AP0C7U9 286 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 ATP5G3P48201 142 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 C16orf82Q7Z2V1 217 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 NECAP1Q8NC96 275 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 FAM122AQ96E09 287 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 ENY2Q9NPA8 101 aa18.55■□□□□ 0.56
SRRM1-222ENST00000596378 TMEM178BH3BS89 294 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 BSXQ3C1V8 233 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 H1FXQ92522 213 aaKnown RBP18.54■□□□□ 0.56
SRRM1-222ENST00000596378 PTPRQQ9UMZ3 2332 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 POLEQ07864 2286 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 PPIAL4EA0A075B759 164 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 PPIAL4DF5H284 164 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 CLN5O75503 358 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 PPIAL4FP0DN26 164 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 REG1BP48304 166 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 NDUFA6P56556 154 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 TMEM200BQ69YZ2 307 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 NANPQ8TBE9 248 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 NEIL1Q96FI4 390 aaPredicted RBP18.54■□□□□ 0.56
SRRM1-222ENST00000596378 MRPL20Q9BYC9 149 aaKnown RBP18.54■□□□□ 0.56
SRRM1-222ENST00000596378 LSM4Q9Y4Z0 139 aaKnown RBP18.54■□□□□ 0.56
SRRM1-222ENST00000596378 PPIAL4AQ9Y536 164 aa18.54■□□□□ 0.56
SRRM1-222ENST00000596378 CST9LP1Q5W188 147 aa18.53■□□□□ 0.56
SRRM1-222ENST00000596378 ARFGEF3Q5TH69 2177 aa18.53■□□□□ 0.56
SRRM1-222ENST00000596378 ARL14EPLP0DKL9 152 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 POU2AF1Q16633 256 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 RTL8BQ17RB0 113 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 ABHD5Q8WTS1 349 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 ZNF714Q96N38 554 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 GAL3ST2Q9H3Q3 398 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 NPVFQ9HCQ7 196 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 J3QR06 171 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST1H2BKO60814 126 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST1H2BJP06899 126 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST1H2BOP23527 126 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST1H2BBP33778 126 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST1H2BDP58876 126 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST1H2BCP62807 126 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST2H2BEQ16778 126 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.52■□□□□ 0.56
SRRM1-222ENST00000596378 OR5T1Q8NG75 326 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST1H2BHQ93079 126 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST1H2BNQ99877 126 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 HIST1H2BMQ99879 126 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 TMEM204Q9BSN7 226 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 TMEM106BQ9NUM4 274 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 DOK5Q9P104 306 aa18.52■□□□□ 0.56
SRRM1-222ENST00000596378 K7ENP7 123 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 UPK2O00526 184 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 S100A8P05109 93 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 IL6RP08887 468 aaPredicted RBP18.51■□□□□ 0.55
SRRM1-222ENST00000596378 SAA1P0DJI8 122 aaPredicted RBP18.51■□□□□ 0.55
SRRM1-222ENST00000596378 SPNS3Q6ZMD2 512 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 MOB3BQ86TA1 216 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 RAB1CQ92928 201 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 SHISA9B4DS77 424 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 B2MP61769 119 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 DIAPH2-AS1Q14236 149 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 SPATA31B1PQ5VZV4 182 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 ZNF833PQ6ZTB9 187 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms