RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 TMEM11P17152 192 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 PAX9P55771 341 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 SPCS3P61009 180 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 RPL8P62917 257 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 HES1Q14469 280 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 MMDQ15546 238 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 PRSS8Q16651 343 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 LRRC75BQ2VPJ9 315 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 C9orf62Q8N4C0 152 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 OR8H1Q8NGG4 311 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 GRPEL2Q8TAA5 225 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 FBXL15Q9H469 300 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 FKBP11Q9NYL4 201 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 METTL1Q9UBP6 276 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 TCF19Q9Y242 345 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 OR51B2Q9Y5P1 312 aa11.76□□□□□ -0.53
SHKBP1-211ENST00000595945 ANK3Q12955 4377 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 TEX50A0A1B0GTY4 177 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 CHST1O43916 411 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 SSSCA1O60232 199 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 MAS1LP35410 378 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 PJVKQ0ZLH3 352 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 C5orf64Q2M2E5 130 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 DEFB112Q30KQ8 113 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 ZNF546Q86UE3 836 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 MMD2Q8IY49 270 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 OR5B3Q8NH48 314 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 DCUN1D4Q92564 292 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 RAB40CQ96S21 281 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 SSX3Q99909 188 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 TMUB1Q9BVT8 246 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 YAE1D1Q9NRH1 226 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 TMEM160Q9NX00 188 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 F8P00451 2351 aa11.75□□□□□ -0.53
SHKBP1-211ENST00000595945 MDFIC2A0A1B0GVS7 189 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 RNF222A6NCQ9 220 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 A6NDX4 124 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 CGB1A6NKQ9 187 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 WRBO00258 174 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 RBMXL2O75526 392 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 CXCL2P19875 107 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 VDAC2P45880 294 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 P2RY1P47900 373 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 TAS2R30P59541 319 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 PRCDQ00LT1 54 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 LGALSLQ3ZCW2 172 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 PPP1R27Q86WC6 154 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 Q8N9W7 124 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 SMIM8Q96KF7 97 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 NDUFA4L2Q9NRX3 87 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 KIAA1456Q9P272 454 aa11.74□□□□□ -0.53
SHKBP1-211ENST00000595945 A0A1B0GW64 132 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 MSGN1A6NI15 193 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 INS-IGF2F8WCM5 200 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 FCN1O00602 326 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 ARPC5O15511 151 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 LY86O95711 162 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 IFNA17P01571 189 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 PVALBP20472 110 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 ZNF345Q14585 488 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 OR1L8Q8NGR8 309 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 DTD1Q8TEA8 209 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 ZNF48Q96MX3 618 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 RBM14Q96PK6 669 aaKnown RBP11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 CIB3Q96Q77 187 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 MFFQ9GZY8 342 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 LYRM2Q9NU23 88 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 C1RLQ9NZP8 487 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 WSB1Q9Y6I7 421 aa11.73□□□□□ -0.53
SHKBP1-211ENST00000595945 CEBPZOSA8MTT3 80 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 H3BUX3 64 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 L7N2F9 121 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 KCNAB3O43448 404 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 GPR137BO60478 399 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 TSC22D2O75157 780 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 OR2F2O95006 317 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 HKR1P10072 659 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 IAPPP10997 89 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 FOSL1P15407 271 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 COMPP49747 757 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 VAMP2P63027 116 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 SPINK9Q5DT21 86 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 C10orf55Q5SWW7 151 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 ACOT7LQ6ZUV0 252 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 OR2C3Q8N628 320 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 COMMD5Q9GZQ3 224 aa11.72□□□□□ -0.53
SHKBP1-211ENST00000595945 FAM24AA6NFZ4 105 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 NCBP2LA6PVI3 153 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 E7EUB6 86 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 FGF16O43320 207 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 LY6G6DO95868 133 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 CA2P00918 260 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 HLA-DRB1P01911 266 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 RPL12P30050 165 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 IER3P46695 156 aa11.71□□□□□ -0.53
SHKBP1-211ENST00000595945 RPL27AP46776 148 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms