RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 POLR2GP62487 172 aaKnown RBP eCLIP10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 EBI3Q14213 229 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 FAM120AOSQ5T036 256 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 ZNF546Q86UE3 836 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 OR11H4Q8NGC9 324 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 TMEM167AQ8TBQ9 72 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 DCUN1D4Q92564 292 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 MAGT1Q9H0U3 335 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 C1RLQ9NZP8 487 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 MBD2Q9UBB5 411 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 METTL1Q9UBP6 276 aaKnown RBP10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 CDC42EP3Q9UKI2 254 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 OR51B2Q9Y5P1 312 aa10.46□□□□□ -0.73
SHKBP1-209ENST00000595803 CEBPZOSA8MTT3 80 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 E5RGE8 158 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 G3V3Q6 166 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 H0YIZ8 118 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 NBR2O15453 112 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 SYNGR2O43760 224 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 CHST1O43916 411 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 DEDDO75618 318 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 SPDEFO95238 335 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 CNTFRP26992 372 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 DYNLT3P51808 116 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 NKX2-5P52952 324 aaPredicted RBP10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 OR2B8PP59922 312 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 SPCS3P61009 180 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 HSPE1P61604 102 aaKnown RBP10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 PLGLAQ15195 96 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 MMDQ15546 238 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 TMEM65Q6PI78 240 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 OR52E5Q8NH55 327 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 CLCC1Q96S66 551 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 SSX3Q99909 188 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 RBKSQ9H477 322 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 OR5AC2Q9NZP5 309 aa10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 SOX21Q9Y651 276 aaPredicted RBP10.45□□□□□ -0.74
SHKBP1-209ENST00000595803 C15orf61A6NNL5 157 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 NCBP2LA6PVI3 153 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 HMSDA8MTL9 139 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 RRHO14718 337 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 SSSCA1O60232 199 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 GPR137BO60478 399 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 ACTL6BO94805 426 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 CRYGBP07316 175 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 LYL1P12980 280 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 F2RL1P55085 397 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 RPL23AP62750 156 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 RPL8P62917 257 aaKnown RBP10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 TNFRSF9Q07011 255 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 ZNF429Q86V71 674 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 MMD2Q8IY49 270 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 INO80EQ8NBZ0 244 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 NPBQ8NG41 125 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 GRPEL2Q8TAA5 225 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 ZDHHC16Q969W1 377 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 RAB40CQ96S21 281 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 COMMD5Q9GZQ3 224 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 FBXL15Q9H469 300 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 ENY2Q9NPA8 101 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 HSPB7Q9UBY9 170 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 FOXA2Q9Y261 457 aaPredicted RBP10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 SIGLEC9Q9Y336 463 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 TENM1Q9UKZ4 2725 aa10.44□□□□□ -0.74
SHKBP1-209ENST00000595803 TEX50A0A1B0GTY4 177 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 ARPC5O15511 151 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 FSHBP01225 129 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 FGF2P09038 288 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 MAS1LP35410 378 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 SRP14P37108 136 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 P2RY1P47900 373 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 LRRC75BQ2VPJ9 315 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 DEFB112Q30KQ8 113 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 AARDQ4LEZ3 155 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 PDLIM3Q53GG5 364 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 PPP1R27Q86WC6 154 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 BCL6BQ8N143 479 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 OR8H1Q8NGG4 311 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 OR1L8Q8NGR8 309 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 CIB3Q96Q77 187 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 HINT2Q9BX68 163 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 MFFQ9GZY8 342 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 ZC4H2Q9NQZ6 224 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 TMEM14BQ9NUH8 114 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 PSENENQ9NZ42 101 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 ZNF257Q9Y2Q1 563 aa10.43□□□□□ -0.74
SHKBP1-209ENST00000595803 OR2F2O95006 317 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 NDUFA3O95167 84 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 LY86O95711 162 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 OPN1MWP04001 364 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 OPN1MW2P0DN77 364 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 OPN1MW3P0DN78 364 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 IAPPP10997 89 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 AANATQ16613 207 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 PRSS8Q16651 343 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 SPINK9Q5DT21 86 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 ACOT7LQ6ZUV0 252 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 C9orf139Q6ZV77 190 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 Q8N6K4 173 aa10.42□□□□□ -0.74
SHKBP1-209ENST00000595803 OR5B3Q8NH48 314 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms