RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 OR51H1Q8NH63 302 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 WDR89Q96FK6 387 aaPredicted RBP12.85□□□□□ -0.35
CCDC9-202ENST00000595659 CEPT1Q9Y6K0 416 aa12.85□□□□□ -0.35
CCDC9-202ENST00000595659 RBMY1BA6NDE4 496 aaKnown RBP12.84□□□□□ -0.35
CCDC9-202ENST00000595659 RBMY1EA6NEQ0 496 aaKnown RBP12.84□□□□□ -0.35
CCDC9-202ENST00000595659 MFSD2BA6NFX1 497 aa12.84□□□□□ -0.35
CCDC9-202ENST00000595659 IFNA6P05013 189 aa12.84□□□□□ -0.35
CCDC9-202ENST00000595659 RBMY1DP0C7P1 496 aaKnown RBP12.84□□□□□ -0.35
CCDC9-202ENST00000595659 OR2B8PP59922 312 aa12.84□□□□□ -0.35
CCDC9-202ENST00000595659 ZNF818PQ6ZRF7 136 aa12.84□□□□□ -0.35
CCDC9-202ENST00000595659 EEF1AKMT3Q96AZ1 226 aa12.84□□□□□ -0.35
CCDC9-202ENST00000595659 SLC2A8Q9NY64 477 aa12.84□□□□□ -0.35
CCDC9-202ENST00000595659 BET1LQ9NYM9 111 aa12.84□□□□□ -0.35
CCDC9-202ENST00000595659 A0A0A6YYH2 397 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 A6NJ64 397 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 UPK2O00526 184 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 S1PR2O95136 353 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 DHFRP00374 187 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 CBLN1P23435 193 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 AADACL3Q5VUY0 350 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 LINC00322Q6ZN03 302 aaPredicted RBP12.83□□□□□ -0.36
CCDC9-202ENST00000595659 GPHB5Q86YW7 130 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 ZBTB34Q8NCN2 500 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 OR5AP2Q8NGF4 316 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 GIMAP1Q8WWP7 306 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 HIPK2Q9H2X6 1198 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 IFT46Q9NQC8 304 aa12.83□□□□□ -0.36
CCDC9-202ENST00000595659 IGLV11-55A0A075B6I3 123 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 IGHV3-35A0A0C4DH35 117 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 TMEM213A2RRL7 107 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 LGALS9O00182 355 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 RBFOX2O43251 390 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC9-202ENST00000595659 HPRT1P00492 218 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 CLEC3BP05452 202 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 RFX2P48378 723 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 TAS2R31P59538 309 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 LSM3P62310 102 aaKnown RBP12.82□□□□□ -0.36
CCDC9-202ENST00000595659 CATR1Q13166 79 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 MSMO1Q15800 293 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 FAM106AQ4KMX7 169 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 TM4SF20Q53R12 229 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 FAM209BQ5JX69 171 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 DMBX1Q8NFW5 382 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 OR10W1Q8NGF6 305 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 OR4A5Q8NH83 315 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 AIFM2Q9BRQ8 373 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 SRD5A3Q9H8P0 318 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 TMEM140Q9NV12 185 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 EHFQ9NZC4 300 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 TNCP24821 2201 aa12.82□□□□□ -0.36
CCDC9-202ENST00000595659 LCE6AA0A183 80 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 IGLC7A0M8Q6 106 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 XRCC3O43542 346 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 PMP2P02689 132 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 NQO2P16083 231 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 HIST1H1BP16401 226 aaKnown RBP12.81□□□□□ -0.36
CCDC9-202ENST00000595659 GPR183P32249 361 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 CBX5P45973 191 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 HERV-K104P61576 105 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 UNQ9165/PRO28630Q6UXU0 137 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 LAX1Q8IWV1 398 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 UXS1Q8NBZ7 420 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 COMMD5Q9GZQ3 224 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 TECRQ9NZ01 308 aaKnown RBP12.81□□□□□ -0.36
CCDC9-202ENST00000595659 MLXQ9UH92 298 aa12.81□□□□□ -0.36
CCDC9-202ENST00000595659 STARD9Q9P2P6 4700 aa12.8□□□□□ -0.36
CCDC9-202ENST00000595659 SCAF4O95104 1147 aaKnown RBP12.8□□□□□ -0.36
CCDC9-202ENST00000595659 GNRHRP30968 328 aa12.8□□□□□ -0.36
CCDC9-202ENST00000595659 RPS19P39019 145 aaKnown RBP12.8□□□□□ -0.36
CCDC9-202ENST00000595659 KCTD21Q4G0X4 260 aa12.8□□□□□ -0.36
CCDC9-202ENST00000595659 ZNF57Q68EA5 555 aaPredicted RBP12.8□□□□□ -0.36
CCDC9-202ENST00000595659 TMEM61Q8N0U2 210 aa12.8□□□□□ -0.36
CCDC9-202ENST00000595659 S100A16Q96FQ6 103 aaKnown RBP12.8□□□□□ -0.36
CCDC9-202ENST00000595659 RLN1P04808 185 aa12.79□□□□□ -0.36
CCDC9-202ENST00000595659 POU2AF1Q16633 256 aa12.79□□□□□ -0.36
CCDC9-202ENST00000595659 KLK9Q2XQG4 91 aa12.79□□□□□ -0.36
CCDC9-202ENST00000595659 BTNL8Q6UX41 500 aa12.79□□□□□ -0.36
CCDC9-202ENST00000595659 SAMD12Q8N8I0 201 aa12.79□□□□□ -0.36
CCDC9-202ENST00000595659 CXorf58Q96LI9 332 aa12.79□□□□□ -0.36
CCDC9-202ENST00000595659 ZNF2Q9BSG1 426 aaPredicted RBP12.79□□□□□ -0.36
CCDC9-202ENST00000595659 PLEKHA2Q9HB19 425 aa12.79□□□□□ -0.36
CCDC9-202ENST00000595659 KLK9Q9UKQ9 250 aa12.79□□□□□ -0.36
CCDC9-202ENST00000595659 NSG2Q9Y328 171 aa12.79□□□□□ -0.36
CCDC9-202ENST00000595659 TRBV7-1A0A0A6YYK4 115 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 IGHV3-21A0A0B4J1V1 117 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 TEX50A0A1B0GTY4 177 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 PGLYRP1O75594 196 aaPredicted RBP12.78□□□□□ -0.36
CCDC9-202ENST00000595659 OR13C7P0DN81 318 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 LPAR6P43657 344 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 TAS2R20P59543 309 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 ZNF585BQ52M93 769 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 UBE2NLQ5JXB2 153 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 TMEM69Q5SWH9 247 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 SLC25A24Q6NUK1 477 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 PLET1Q6UQ28 207 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 OR52B4Q8NGK2 314 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 ZNF502Q8TBZ5 544 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 HINT2Q9BX68 163 aa12.78□□□□□ -0.36
CCDC9-202ENST00000595659 QTRT1Q9BXR0 403 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms