RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 DBX1A6NMT0 343 aa17.73■□□□□ 0.43
SNRNP70-204ENST00000595231 MAS1LP35410 378 aa17.73■□□□□ 0.43
SNRNP70-204ENST00000595231 CRIP2P52943 208 aaPredicted RBP17.73■□□□□ 0.43
SNRNP70-204ENST00000595231 Q6ZRM9 215 aa17.73■□□□□ 0.43
SNRNP70-204ENST00000595231 SGMS2Q8NHU3 365 aa17.73■□□□□ 0.43
SNRNP70-204ENST00000595231 SRSF12Q8WXF0 261 aaKnown RBP17.73■□□□□ 0.43
SNRNP70-204ENST00000595231 RRNAD1Q96FB5 475 aaKnown RBP17.73■□□□□ 0.43
SNRNP70-204ENST00000595231 SHPKQ9UHJ6 478 aa17.73■□□□□ 0.43
SNRNP70-204ENST00000595231 A0A0B4J293 547 aa17.72■□□□□ 0.43
SNRNP70-204ENST00000595231 G3V318 75 aa17.72■□□□□ 0.43
SNRNP70-204ENST00000595231 ACTL6BO94805 426 aa17.72■□□□□ 0.43
SNRNP70-204ENST00000595231 C19orf54Q5BKX5 351 aa17.72■□□□□ 0.43
SNRNP70-204ENST00000595231 KLHDC1Q8N7A1 406 aa17.72■□□□□ 0.43
SNRNP70-204ENST00000595231 GRPEL2Q8TAA5 225 aa17.72■□□□□ 0.43
SNRNP70-204ENST00000595231 LSM10Q969L4 123 aaKnown RBP17.72■□□□□ 0.43
SNRNP70-204ENST00000595231 SEC22CQ9BRL7 303 aa17.72■□□□□ 0.43
SNRNP70-204ENST00000595231 WSB1Q9Y6I7 421 aa17.72■□□□□ 0.43
SNRNP70-204ENST00000595231 TET2Q6N021 2002 aaPredicted RBP17.72■□□□□ 0.43
SNRNP70-204ENST00000595231 A0A1B0GW64 132 aa17.71■□□□□ 0.43
SNRNP70-204ENST00000595231 MSGN1A6NI15 193 aa17.71■□□□□ 0.43
SNRNP70-204ENST00000595231 CGB1A6NKQ9 187 aa17.71■□□□□ 0.43
SNRNP70-204ENST00000595231 INMT-MINDY4F8WBC2 141 aa17.71■□□□□ 0.43
SNRNP70-204ENST00000595231 HAX1O00165 279 aa17.71■□□□□ 0.43
SNRNP70-204ENST00000595231 VDAC1P21796 283 aa17.71■□□□□ 0.43
SNRNP70-204ENST00000595231 C10orf99Q6UWK7 81 aa17.71■□□□□ 0.43
SNRNP70-204ENST00000595231 FAM219AQ8IW50 185 aa17.71■□□□□ 0.43
SNRNP70-204ENST00000595231 MITD1Q8WV92 249 aa17.71■□□□□ 0.43
SNRNP70-204ENST00000595231 TMEM14BQ9NUH8 114 aa17.71■□□□□ 0.43
SNRNP70-204ENST00000595231 SNAPC5O75971 98 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 OPN1MWP04001 364 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 IL5P05113 134 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 OPN1MW2P0DN77 364 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 OPN1MW3P0DN78 364 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 PPIFP30405 207 aaKnown RBP17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 OR2B8PP59922 312 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 KRTAP10-3P60369 221 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 CFHR3Q02985 330 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 NMSQ5H8A3 153 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 LFNGQ8NES3 379 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 ABHD5Q8WTS1 349 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 CHPT1Q8WUD6 406 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 GPR146Q96CH1 333 aa17.71■□□□□ 0.42
SNRNP70-204ENST00000595231 TEX50A0A1B0GTY4 177 aa17.7■□□□□ 0.42
SNRNP70-204ENST00000595231 C15orf61A6NNL5 157 aa17.7■□□□□ 0.42
SNRNP70-204ENST00000595231 AKIRIN2Q53H80 203 aa17.7■□□□□ 0.42
SNRNP70-204ENST00000595231 ASPHD1Q5U4P2 390 aa17.7■□□□□ 0.42
SNRNP70-204ENST00000595231 CENPVQ7Z7K6 275 aaPredicted RBP17.7■□□□□ 0.42
SNRNP70-204ENST00000595231 PRNDQ9UKY0 176 aa17.7■□□□□ 0.42
SNRNP70-204ENST00000595231 FOXA2Q9Y261 457 aaPredicted RBP17.7■□□□□ 0.42
SNRNP70-204ENST00000595231 TRAV41A0A0B4J266 112 aa17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 DUXBA0A1W2PPF3 345 aa17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 RPL27AP46776 148 aaKnown RBP17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 RGS21Q2M5E4 152 aa17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 ZNF329Q86UD4 541 aa17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 MINDY2Q8NBR6 621 aa17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 OR4A16Q8NH70 328 aa17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 RNASE11Q8TAA1 199 aaKnown RBP17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 ZNF431Q8TF32 576 aaPredicted RBP17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 WFDC12Q8WWY7 111 aa17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 COMMD5Q9GZQ3 224 aa17.69■□□□□ 0.42
SNRNP70-204ENST00000595231 PIGBOS1A0A0B4J2F0 54 aa17.68■□□□□ 0.42
SNRNP70-204ENST00000595231 TEX22C9J3V5 150 aa17.68■□□□□ 0.42
SNRNP70-204ENST00000595231 ECSCRQ19T08 205 aa17.68■□□□□ 0.42
SNRNP70-204ENST00000595231 ZNF429Q86V71 674 aa17.68■□□□□ 0.42
SNRNP70-204ENST00000595231 COQ8AQ8NI60 647 aa17.68■□□□□ 0.42
SNRNP70-204ENST00000595231 FKBP11Q9NYL4 201 aa17.68■□□□□ 0.42
SNRNP70-204ENST00000595231 OR51B2Q9Y5P1 312 aa17.68■□□□□ 0.42
SNRNP70-204ENST00000595231 PSMB11A5LHX3 300 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 APELAP0DMC3 54 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 TMEM267Q0VDI3 215 aaPredicted RBP17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 SPIN2AQ99865 258 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 SPIN2BQ9BPZ2 258 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 QTRT1Q9BXR0 403 aaKnown RBP17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 GON7Q9BXV9 100 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 NDUFA4L2Q9NRX3 87 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 STAB1Q9NY15 2570 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 SOX15O60248 233 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 HOXB5P09067 269 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 AARDQ4LEZ3 155 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 UNQ5815/PRO19632Q6UWF5 114 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 OR5AU1Q8NGC0 362 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 OR5B3Q8NH48 314 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 FYTTD1Q96QD9 318 aaKnown RBP17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 PHB2Q99623 299 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 CACNG5Q9UF02 275 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 ZNF257Q9Y2Q1 563 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 TMED3Q9Y3Q3 217 aa17.67■□□□□ 0.42
SNRNP70-204ENST00000595231 HMX3A6NHT5 357 aa17.66■□□□□ 0.42
SNRNP70-204ENST00000595231 PRAF2O60831 178 aa17.66■□□□□ 0.42
SNRNP70-204ENST00000595231 ADAP1O75689 374 aa17.66■□□□□ 0.42
SNRNP70-204ENST00000595231 DHFRP00374 187 aa17.66■□□□□ 0.42
SNRNP70-204ENST00000595231 SRSF4Q08170 494 aaKnown RBP17.66■□□□□ 0.42
SNRNP70-204ENST00000595231 OR1L8Q8NGR8 309 aa17.66■□□□□ 0.42
SNRNP70-204ENST00000595231 RBMXL2O75526 392 aaKnown RBP17.65■□□□□ 0.42
SNRNP70-204ENST00000595231 HSPE1P61604 102 aaKnown RBP17.65■□□□□ 0.42
SNRNP70-204ENST00000595231 OXA1LQ15070 435 aa17.65■□□□□ 0.42
SNRNP70-204ENST00000595231 TCTEX1D4Q5JR98 221 aa17.65■□□□□ 0.42
SNRNP70-204ENST00000595231 GGNBP1Q5YKI7 109 aa17.65■□□□□ 0.42
SNRNP70-204ENST00000595231 TMEM68Q96MH6 324 aa17.65■□□□□ 0.42
SNRNP70-204ENST00000595231 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms