RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 HEATR1Q9H583 2144 aaKnown RBP10.42□□□□□ -0.74
LIG1-207ENST00000594759 PATE3B3GLJ2 98 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 TSPAN2O60636 221 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 MUC15Q8N387 334 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 CLUHP3Q96NS8 147 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 ZNF355PQ9NSJ1 428 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 PPIAL4EA0A075B759 164 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 SPINT2O43291 252 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 PPIAL4FP0DN26 164 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 MAFAQ8NHW3 353 aaPredicted RBP10.42□□□□□ -0.74
LIG1-207ENST00000594759 GEMIN7Q9H840 131 aaKnown RBP10.42□□□□□ -0.74
LIG1-207ENST00000594759 GP6Q9HCN6 339 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 A0A1B0GWB2 263 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 TEPPQ6URK8 271 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 ZNF318Q5VUA4 2279 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 FCGR3BO75015 233 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 GDF1P27539 372 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 LHX2P50458 406 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 ARL16Q0P5N6 197 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 DCAF12Q5T6F0 453 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 LIME1Q9H400 295 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 NPVFQ9HCQ7 196 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 C19orf67A6NJJ6 358 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 ZFP36L1Q07352 338 aaKnown RBP10.41□□□□□ -0.74
LIG1-207ENST00000594759 MORN2Q502X0 79 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 BVES-AS1Q5T3Y7 98 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 CFAP161Q6P656 301 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 ANKRD37Q7Z713 158 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 FAM131CQ96AQ9 280 aa10.41□□□□□ -0.74
LIG1-207ENST00000594759 MRPL33O75394 65 aaKnown RBP10.4□□□□□ -0.74
LIG1-207ENST00000594759 GCSAMLQ5JQS6 135 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 SLC25A40Q8TBP6 338 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 PLPPR2Q96GM1 343 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 C1orf147Q96MC9 270 aaPredicted RBP10.4□□□□□ -0.74
LIG1-207ENST00000594759 ARRDC1-AS1Q9H2J1 176 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 TMEM38BQ9NVV0 291 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 COX7A2P2O60397 106 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 P01737 135 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 SLC25A5P05141 298 aaKnown RBP10.4□□□□□ -0.74
LIG1-207ENST00000594759 LGALS4P56470 323 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 SLC25A47Q6Q0C1 308 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 RPS19BP1Q86WX3 136 aaKnown RBP10.4□□□□□ -0.74
LIG1-207ENST00000594759 OR10D3Q8NH80 312 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 SSBP4Q9BWG4 385 aaPredicted RBP10.4□□□□□ -0.74
LIG1-207ENST00000594759 CHODLQ9H9P2 273 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 RALGAPA1Q6GYQ0 2036 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 IZUMO1RA6ND01 250 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 DEFB125Q8N687 156 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 ANAPC13Q9BS18 74 aa10.4□□□□□ -0.74
LIG1-207ENST00000594759 TSSC4Q9Y5U2 329 aaPredicted RBP10.4□□□□□ -0.74
LIG1-207ENST00000594759 MKI67P46013 3256 aaKnown RBP10.4□□□□□ -0.75
LIG1-207ENST00000594759 A8MWL6 223 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 TMPRSS2O15393 492 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 NGFP01138 241 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 PRSS1P07477 247 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 GRPP07492 148 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 SAMD5Q5TGI4 173 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 HES3Q5TGS1 186 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 HAPLN4Q86UW8 402 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 MS4A6AQ9H2W1 248 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.39□□□□□ -0.75
LIG1-207ENST00000594759 SCGB1C2P0DMR2 95 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 EDDM3AQ14507 147 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 TIMM23BQ5SRD1 257 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 TMEM144Q7Z5S9 345 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 STAG3L2P0CL84 134 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 PAX9P55771 341 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 RFESDQ8TAC1 157 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 ZNF501Q96CX3 271 aaPredicted RBP10.39□□□□□ -0.75
LIG1-207ENST00000594759 S1PR3Q99500 378 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 IL36GQ9NZH8 169 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 TIAF1O95411 115 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 CGAP01215 116 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 CT45A6P0DMU7 189 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 CT45A5P0DMU8 189 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 CT45A7P0DMV0 189 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 CX3CL1P78423 397 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 CT45A1Q5HYN5 189 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 BHLHA15Q7RTS1 189 aaPredicted RBP10.39□□□□□ -0.75
LIG1-207ENST00000594759 YRDCQ86U90 279 aaKnown RBP10.39□□□□□ -0.75
LIG1-207ENST00000594759 CT45A3Q8NHU0 189 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 FOXB1Q99853 325 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 OSTCQ9NRP0 149 aa10.39□□□□□ -0.75
LIG1-207ENST00000594759 MRPL27Q9P0M9 148 aaKnown RBP10.39□□□□□ -0.75
LIG1-207ENST00000594759 LRRC30A6NM36 301 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 ETV2O00321 342 aaPredicted RBP10.38□□□□□ -0.75
LIG1-207ENST00000594759 GALR2O43603 387 aaPredicted RBP10.38□□□□□ -0.75
LIG1-207ENST00000594759 SLC25A17O43808 307 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 PPP1R35Q8TAP8 253 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 ZNF581Q9P0T4 197 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 POLDIP2Q9Y2S7 368 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 PLXNB3Q9ULL4 1909 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 CEBPDP49716 269 aaPredicted RBP10.38□□□□□ -0.75
LIG1-207ENST00000594759 SSR4P51571 173 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 TTC32Q5I0X7 151 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 ZDHHC16Q969W1 377 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 OBP2BQ9NPH6 170 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 AP5S1Q9NUS5 200 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 B4GALT7Q9UBV7 327 aa10.38□□□□□ -0.75
LIG1-207ENST00000594759 PSG11Q9UQ72 335 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms