RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CADM3Q8N126 398 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 TMEM68Q96MH6 324 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 TSC22D3Q99576 134 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 KCNIP3Q9Y2W7 256 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 IGLV1-40P01703 118 aa11.68□□□□□ -0.54
DDX39A-221ENST00000593026 RPLP1P05386 114 aaKnown RBP11.68□□□□□ -0.54
DDX39A-221ENST00000593026 PF4V1P10720 104 aa11.68□□□□□ -0.54
DDX39A-221ENST00000593026 PSMB8P28062 276 aa11.68□□□□□ -0.54
DDX39A-221ENST00000593026 TMEM65Q6PI78 240 aa11.68□□□□□ -0.54
DDX39A-221ENST00000593026 LCNL1Q6ZST4 164 aa11.68□□□□□ -0.54
DDX39A-221ENST00000593026 CENPSQ8N2Z9 138 aa11.68□□□□□ -0.54
DDX39A-221ENST00000593026 OR5M8Q8NGP6 311 aa11.68□□□□□ -0.54
DDX39A-221ENST00000593026 GLYATL2Q8WU03 294 aa11.68□□□□□ -0.54
DDX39A-221ENST00000593026 GALNT14Q96FL9 552 aa11.68□□□□□ -0.54
DDX39A-221ENST00000593026 FYTTD1Q96QD9 318 aaKnown RBP11.68□□□□□ -0.54
DDX39A-221ENST00000593026 COMMD5Q9GZQ3 224 aa11.68□□□□□ -0.54
DDX39A-221ENST00000593026 TNCP24821 2201 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 ADARB2-AS1A8MUL3 147 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 SOX15O60248 233 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 UPK1BO75841 260 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 CDS2O95674 445 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 OR9G9P0C7N8 305 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 APELAP0DMC3 54 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 ANXA3P12429 323 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 MYOD1P15172 320 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 RPL23AP62750 156 aaKnown RBP11.67□□□□□ -0.54
DDX39A-221ENST00000593026 TMEM128Q5BJH2 165 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 ASPHD1Q5U4P2 390 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 RNF152Q8N8N0 203 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 RNASE11Q8TAA1 199 aaKnown RBP11.67□□□□□ -0.54
DDX39A-221ENST00000593026 ZFP57Q9NU63 452 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 PRNDQ9UKY0 176 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 NSG2Q9Y328 171 aa11.67□□□□□ -0.54
DDX39A-221ENST00000593026 HMX3A6NHT5 357 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 TEX22C9J3V5 150 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 E7EUB6 86 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 IGKV1-5P01602 117 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 VAMP1P23763 118 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 OR2B8PP59922 312 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 SUPT4H1P63272 117 aaKnown RBP11.66□□□□□ -0.54
DDX39A-221ENST00000593026 TMEM187Q14656 261 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 TMEM268Q5VZI3 342 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 ZNF695Q8IW36 515 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 OR5T1Q8NG75 326 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 LHFPL5Q8TAF8 219 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 RBPMSQ93062 196 aaKnown RBP11.66□□□□□ -0.54
DDX39A-221ENST00000593026 RRNAD1Q96FB5 475 aaKnown RBP11.66□□□□□ -0.54
DDX39A-221ENST00000593026 KLK15Q9H2R5 256 aa11.66□□□□□ -0.54
DDX39A-221ENST00000593026 A0A1B0GW64 132 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 C15orf61A6NNL5 157 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 NUDT19A8MXV4 375 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 H3BUA1 57 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 TSPAN15O95858 294 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 RAB9AP51151 201 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 SRPXP78539 464 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 ASAH1Q13510 395 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 MZT2BQ6NZ67 158 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 SLC25A42Q86VD7 318 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 SELENOHQ8IZQ5 122 aaKnown RBP11.65□□□□□ -0.54
DDX39A-221ENST00000593026 OR1L8Q8NGR8 309 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 OR4A16Q8NH70 328 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 FAM110DQ8TAY7 271 aaPredicted RBP11.65□□□□□ -0.54
DDX39A-221ENST00000593026 CASTOR1Q8WTX7 329 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 IL22RA2Q969J5 263 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 TMEM56Q96MV1 263 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 MS4A10Q96PG2 267 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 QTRT1Q9BXR0 403 aaKnown RBP11.65□□□□□ -0.54
DDX39A-221ENST00000593026 ZNF355PQ9NSJ1 428 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 TMEM14BQ9NUH8 114 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 COA4Q9NYJ1 87 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 FKBP11Q9NYL4 201 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 PRR13Q9NZ81 148 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 TBC1D24Q9ULP9 559 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 FLVCR2Q9UPI3 526 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 OR51B2Q9Y5P1 312 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 TMEM56-RWDD3S4R434 201 aa11.65□□□□□ -0.54
DDX39A-221ENST00000593026 TEX50A0A1B0GTY4 177 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 CGB1A6NKQ9 187 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 RBMXL2O75526 392 aaKnown RBP11.64□□□□□ -0.55
DDX39A-221ENST00000593026 P0C879 139 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 SLC6A1P30531 599 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 CDX1P47902 265 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-221ENST00000593026 TPPP2P59282 170 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 UBE2MP61081 183 aaKnown RBP11.64□□□□□ -0.55
DDX39A-221ENST00000593026 PPP1R1AQ13522 171 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 PRR31Q5SQ13 230 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 THOC7Q6I9Y2 204 aaKnown RBP11.64□□□□□ -0.55
DDX39A-221ENST00000593026 FAM219AQ8IW50 185 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 LGI3Q8N145 548 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 KLHL30-AS1Q8NEE0 82 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 OR4F17Q8NGA8 305 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 OR5B3Q8NH48 314 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 MYOZ3Q8TDC0 251 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 OR4F4Q96R69 305 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 HINT2Q9BX68 163 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 SLA2Q9H6Q3 261 aa11.64□□□□□ -0.55
DDX39A-221ENST00000593026 PIGBOS1A0A0B4J2F0 54 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 DBX1A6NMT0 343 aa11.63□□□□□ -0.55
DDX39A-221ENST00000593026 SFT2D2O95562 160 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms