RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 ATG2BQ96BY7 2078 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 TRAV38-1A0A0B4J264 116 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 TRAV24A0A0B4J272 114 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 TRAV17A0A0B4J275 112 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 TCF21O43680 179 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 REG1AP05451 166 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 CCL2P13500 99 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 PRDX2P32119 198 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 GFI1BQ5VTD9 330 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 ASCL5Q7RTU5 278 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 LYG1Q8N1E2 194 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 STPG3Q8N7X2 389 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 OR1L1Q8NH94 360 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 SSMEM1Q8WWF3 244 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 MISP3Q96FF7 219 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 KLHDC3Q9BQ90 382 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 ATG101Q9BSB4 218 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 NDFIP1Q9BT67 221 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 TMEM140Q9NV12 185 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 ELOVL5Q9NYP7 299 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 MRPL27Q9P0M9 148 aaKnown RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 COL6A3P12111 3177 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 C12orf77C9JDV5 145 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 YPEL1O60688 119 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 LIPFP07098 398 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 IL6RP08887 468 aaPredicted RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 MYF5P13349 255 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 HTR1DP28221 377 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 MPV17P39210 176 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TDGF1P3P51864 188 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 PAX9P55771 341 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 RPS16P62249 146 aaKnown RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 AESQ08117 197 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 RNF151Q2KHN1 245 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 MIC13Q5XKP0 118 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 PMS2CLQ68D20 193 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 SLC25A34Q6PIV7 304 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 BPIFA4PQ86YQ2 179 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 OR2Z1Q8NG97 314 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 OR4F17Q8NGA8 305 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 OR52L2PQ8NGH6 319 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 OR4A5Q8NH83 315 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ZNF596Q8TC21 504 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ORAOV1Q8WV07 137 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 SMIM12Q96EX1 92 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ZNF488Q96MN9 340 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 YPEL2Q96QA6 119 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 PAXXQ9BUH6 204 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 OPN3Q9H1Y3 402 aaPredicted RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 NUP210LQ5VU65 1888 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TDRD6O60522 2096 aaKnown RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 A0A1W2PQM1 296 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ZNF324O75467 553 aaPredicted RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 IGKV1-5P01602 117 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 CBLN1P23435 193 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 SRIP30626 198 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ADMP35318 185 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 FABP6P51161 128 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 MFAP2P55001 183 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TFF3Q07654 80 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 RTP5Q14D33 572 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 CENPWQ5EE01 88 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 MRPL54Q6P161 138 aaKnown RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 ACP7Q6ZNF0 438 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TMEM144Q7Z5S9 345 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 PLPPR1Q8TBJ4 325 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TNFRSF14Q92956 283 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TMEM70Q9BUB7 260 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 DEFB127Q9H1M4 99 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ZNF430Q9H8G1 570 aaPredicted RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 DNAJC4Q9NNZ3 241 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 MBNL3Q9NUK0 354 aaKnown RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 RNF7Q9UBF6 113 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 LAMTOR2Q9Y2Q5 125 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TIMM8BQ9Y5J9 83 aaPredicted RBP2.97□□□□□ -1.93
VMP1-216ENST00000592790 C5orf42Q9H799 3197 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TM4SF5O14894 197 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 SERF1AO75920 110 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 UMODP07911 640 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 MC5RP33032 325 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 MAGEA5P43359 124 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 KRTAP27-1Q3LI81 207 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 LRRC10Q5BKY1 277 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 Q6AWC8 147 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 PRR27Q6MZM9 219 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 PRSS57Q6UWY2 283 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 GGNQ86UU5 652 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ZADH2Q8N4Q0 377 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 RFESDQ8TAC1 157 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ABHD17AQ96GS6 310 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 NABP2Q9BQ15 211 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 C11orf1Q9H5F2 150 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 AAMDCQ9H7C9 122 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 NRN1Q9NPD7 142 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ASCL3Q9NQ33 180 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 RPH3ALQ9UNE2 315 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 ZNF257Q9Y2Q1 563 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 LRRK2Q5S007 2527 aa2.97□□□□□ -1.93
VMP1-216ENST00000592790 TRAV9-2A0A087WT02 112 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms