RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ANKRD55Q3KP44 614 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 TIMM50Q3ZCQ8 353 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 ZNF773Q6PK81 442 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 HSD17B13Q7Z5P4 300 aaPredicted RBP14.21□□□□□ -0.13
CCDC43-205ENST00000592333 CROCCP3Q8IVE0 287 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 SPAG16Q8N0X2 631 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 CADM3Q8N126 398 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 MARC2Q969Z3 335 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 SLC25A38Q96DW6 304 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 CCL28Q9NRJ3 127 aa14.21□□□□□ -0.13
CCDC43-205ENST00000592333 IGLV11-55A0A075B6I3 123 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 TRAV25A0A0B4J276 109 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 CYB5BO43169 146 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 NDUFB8O95169 186 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 CD7P09564 240 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 AREGP15514 252 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 ELLP55199 621 aaPredicted RBP14.2□□□□□ -0.14
CCDC43-205ENST00000592333 ZNF57Q68EA5 555 aaPredicted RBP14.2□□□□□ -0.14
CCDC43-205ENST00000592333 CLEC19AQ6UXS0 136 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 OR5AP2Q8NGF4 316 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 SECTM1Q8WVN6 248 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 AUNIPQ9H7T9 357 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 PLEKHA2Q9HB19 425 aa14.2□□□□□ -0.14
CCDC43-205ENST00000592333 SACSQ9NZJ4 4579 aa14.19□□□□□ -0.14
CCDC43-205ENST00000592333 OR2B8PP59922 312 aa14.19□□□□□ -0.14
CCDC43-205ENST00000592333 GUCA2BQ16661 112 aa14.19□□□□□ -0.14
CCDC43-205ENST00000592333 GVQW1Q8N7I0 195 aa14.19□□□□□ -0.14
CCDC43-205ENST00000592333 ATP6V0BQ99437 205 aa14.19□□□□□ -0.14
CCDC43-205ENST00000592333 LYSTQ99698 3801 aa14.19□□□□□ -0.14
CCDC43-205ENST00000592333 COMMD5Q9GZQ3 224 aa14.19□□□□□ -0.14
CCDC43-205ENST00000592333 SLC5A7Q9GZV3 580 aa14.19□□□□□ -0.14
CCDC43-205ENST00000592333 HRASLSQ9HDD0 168 aa14.19□□□□□ -0.14
CCDC43-205ENST00000592333 STARD9Q9P2P6 4700 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 TMEM213A2RRL7 107 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 RBMY1BA6NDE4 496 aaKnown RBP14.18□□□□□ -0.14
CCDC43-205ENST00000592333 RBMY1EA6NEQ0 496 aaKnown RBP14.18□□□□□ -0.14
CCDC43-205ENST00000592333 UPK2O00526 184 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 ATP6V1G2O95670 118 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 HLA-AP01891 365 aaKnown RBP14.18□□□□□ -0.14
CCDC43-205ENST00000592333 CLEC3BP05452 202 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 RBMY1DP0C7P1 496 aaKnown RBP14.18□□□□□ -0.14
CCDC43-205ENST00000592333 C8orf88P0DMB2 117 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 PTBP1P26599 531 aaKnown RBP eCLIP14.18□□□□□ -0.14
CCDC43-205ENST00000592333 MXD1Q05195 221 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 IDNKQ5T6J7 187 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 SSX9Q7RTT3 188 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 DEFB125Q8N687 156 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 OR5H6Q8NGV6 325 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 SRD5A3Q9H8P0 318 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 COMMD9Q9P000 198 aa14.18□□□□□ -0.14
CCDC43-205ENST00000592333 ZNF320A2RRD8 509 aa14.17□□□□□ -0.14
CCDC43-205ENST00000592333 CGB1A6NKQ9 187 aa14.17□□□□□ -0.14
CCDC43-205ENST00000592333 DHRS11Q6UWP2 260 aa14.17□□□□□ -0.14
CCDC43-205ENST00000592333 VN1R17PQ8TDU5 208 aa14.17□□□□□ -0.14
CCDC43-205ENST00000592333 WDR89Q96FK6 387 aaPredicted RBP14.17□□□□□ -0.14
CCDC43-205ENST00000592333 MRPL27Q9P0M9 148 aaKnown RBP14.17□□□□□ -0.14
CCDC43-205ENST00000592333 IGLC7A0M8Q6 106 aa14.16□□□□□ -0.14
CCDC43-205ENST00000592333 SULT1C2O00338 296 aa14.16□□□□□ -0.14
CCDC43-205ENST00000592333 TNFSF12O43508 249 aa14.16□□□□□ -0.14
CCDC43-205ENST00000592333 XRCC3O43542 346 aa14.16□□□□□ -0.14
CCDC43-205ENST00000592333 JTBO76095 146 aa14.16□□□□□ -0.14
CCDC43-205ENST00000592333 ZNF818PQ6ZRF7 136 aa14.16□□□□□ -0.14
CCDC43-205ENST00000592333 TMEM61Q8N0U2 210 aa14.16□□□□□ -0.14
CCDC43-205ENST00000592333 UXS1Q8NBZ7 420 aa14.16□□□□□ -0.14
CCDC43-205ENST00000592333 ZNF502Q8TBZ5 544 aa14.16□□□□□ -0.14
CCDC43-205ENST00000592333 S100A16Q96FQ6 103 aaKnown RBP14.16□□□□□ -0.14
CCDC43-205ENST00000592333 QTRT1Q9BXR0 403 aaKnown RBP14.16□□□□□ -0.14
CCDC43-205ENST00000592333 UFC1Q9Y3C8 167 aa14.16□□□□□ -0.14
CCDC43-205ENST00000592333 LOC100506127A0A0U1RQW1 187 aa14.15□□□□□ -0.14
CCDC43-205ENST00000592333 CLEC2LP0C7M8 214 aa14.15□□□□□ -0.14
CCDC43-205ENST00000592333 MYOD1P15172 320 aa14.15□□□□□ -0.14
CCDC43-205ENST00000592333 C19orf35Q6ZS72 473 aa14.15□□□□□ -0.14
CCDC43-205ENST00000592333 OR52B4Q8NGK2 314 aa14.15□□□□□ -0.14
CCDC43-205ENST00000592333 GPHA2Q96T91 129 aa14.15□□□□□ -0.14
CCDC43-205ENST00000592333 MLXQ9UH92 298 aa14.15□□□□□ -0.14
CCDC43-205ENST00000592333 IGHV3-23P01764 117 aa14.14□□□□□ -0.15
CCDC43-205ENST00000592333 GNRHRP30968 328 aa14.14□□□□□ -0.15
CCDC43-205ENST00000592333 HERV-K104P61576 105 aa14.14□□□□□ -0.15
CCDC43-205ENST00000592333 KCTD21Q4G0X4 260 aa14.14□□□□□ -0.15
CCDC43-205ENST00000592333 AADACL3Q5VUY0 350 aa14.14□□□□□ -0.15
CCDC43-205ENST00000592333 PLET1Q6UQ28 207 aa14.14□□□□□ -0.15
CCDC43-205ENST00000592333 GDPD1Q8N9F7 314 aa14.14□□□□□ -0.15
CCDC43-205ENST00000592333 DMBX1Q8NFW5 382 aa14.14□□□□□ -0.15
CCDC43-205ENST00000592333 ZNF436Q9C0F3 470 aaPredicted RBP14.14□□□□□ -0.15
CCDC43-205ENST00000592333 TMEM140Q9NV12 185 aa14.14□□□□□ -0.15
CCDC43-205ENST00000592333 DNAH1Q9P2D7 4330 aa14.14□□□□□ -0.15
CCDC43-205ENST00000592333 MFSD2BA6NFX1 497 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 SERPINE2P07093 398 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 TRAPPC2P0DI81 140 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 TRAPPC2BP0DI82 140 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 PTHLHP12272 177 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 EDN2P20800 178 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 F2RP25116 425 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 FXYD4P59646 89 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 ERVK-16P61578 105 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 SPSB3Q6PJ21 355 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 RBPMS2Q6ZRY4 209 aaKnown RBP14.13□□□□□ -0.15
CCDC43-205ENST00000592333 OR1L6Q8NGR2 347 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 OR1L8Q8NGR8 309 aa14.13□□□□□ -0.15
CCDC43-205ENST00000592333 GGTLC1Q9BX51 225 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms