RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 KLF5Q13887 457 aaPredicted RBP20.88■□□□□ 0.93
SMAD4-213ENST00000591914 DMBX1Q8NFW5 382 aa20.88■□□□□ 0.93
SMAD4-213ENST00000591914 CCDC59Q9P031 241 aaKnown RBP20.88■□□□□ 0.93
SMAD4-213ENST00000591914 CRYGCP07315 174 aa20.87■□□□□ 0.93
SMAD4-213ENST00000591914 AREGP15514 252 aa20.87■□□□□ 0.93
SMAD4-213ENST00000591914 OR2B8PP59922 312 aa20.87■□□□□ 0.93
SMAD4-213ENST00000591914 ATP5G2Q06055 141 aa20.87■□□□□ 0.93
SMAD4-213ENST00000591914 ZNF585BQ52M93 769 aa20.87■□□□□ 0.93
SMAD4-213ENST00000591914 PHLDA2Q53GA4 152 aa20.87■□□□□ 0.93
SMAD4-213ENST00000591914 C19orf35Q6ZS72 473 aa20.87■□□□□ 0.93
SMAD4-213ENST00000591914 FCAMRQ8WWV6 532 aa20.87■□□□□ 0.93
SMAD4-213ENST00000591914 DPPA5A6NC42 116 aa20.86■□□□□ 0.93
SMAD4-213ENST00000591914 MARCH11A6NNE9 402 aa20.86■□□□□ 0.93
SMAD4-213ENST00000591914 TBPP20226 339 aa20.86■□□□□ 0.93
SMAD4-213ENST00000591914 PSMB6P28072 239 aa20.86■□□□□ 0.93
SMAD4-213ENST00000591914 EXOSC2Q13868 293 aaKnown RBP20.86■□□□□ 0.93
SMAD4-213ENST00000591914 KLK9Q2XQG4 91 aa20.86■□□□□ 0.93
SMAD4-213ENST00000591914 SLC38A6Q8IZM9 456 aa20.86■□□□□ 0.93
SMAD4-213ENST00000591914 CADM3Q8N126 398 aa20.86■□□□□ 0.93
SMAD4-213ENST00000591914 KLK9Q9UKQ9 250 aa20.86■□□□□ 0.93
SMAD4-213ENST00000591914 LSM4Q9Y4Z0 139 aaKnown RBP20.86■□□□□ 0.93
SMAD4-213ENST00000591914 OR2J3O76001 311 aa20.85■□□□□ 0.93
SMAD4-213ENST00000591914 CD3DP04234 171 aa20.85■□□□□ 0.93
SMAD4-213ENST00000591914 CTRB1P17538 263 aa20.85■□□□□ 0.93
SMAD4-213ENST00000591914 LPAR6P43657 344 aa20.85■□□□□ 0.93
SMAD4-213ENST00000591914 ERVK-16P61578 105 aa20.85■□□□□ 0.93
SMAD4-213ENST00000591914 RNASE10Q5GAN6 216 aaKnown RBP20.85■□□□□ 0.93
SMAD4-213ENST00000591914 CTRB2Q6GPI1 263 aa20.85■□□□□ 0.93
SMAD4-213ENST00000591914 FANCD2OSQ96PS1 177 aa20.85■□□□□ 0.93
SMAD4-213ENST00000591914 OR4C12Q96R67 309 aa20.85■□□□□ 0.93
SMAD4-213ENST00000591914 ELOVL1Q9BW60 279 aa20.85■□□□□ 0.93
SMAD4-213ENST00000591914 FAM212BQ9NTI7 297 aaPredicted RBP20.85■□□□□ 0.93
SMAD4-213ENST00000591914 COL7A1Q02388 2944 aa20.85■□□□□ 0.93
SMAD4-213ENST00000591914 IFNA6P05013 189 aa20.84■□□□□ 0.93
SMAD4-213ENST00000591914 RPA2P15927 270 aa20.84■□□□□ 0.93
SMAD4-213ENST00000591914 S100GP29377 79 aa20.84■□□□□ 0.93
SMAD4-213ENST00000591914 C15orf32Q32M92 178 aa20.84■□□□□ 0.93
SMAD4-213ENST00000591914 LHFPL1Q86WI0 220 aa20.84■□□□□ 0.93
SMAD4-213ENST00000591914 ARRDC1Q8N5I2 433 aa20.84■□□□□ 0.93
SMAD4-213ENST00000591914 B9D2Q9BPU9 175 aa20.84■□□□□ 0.93
SMAD4-213ENST00000591914 SRSF8Q9BRL6 282 aaKnown RBP20.84■□□□□ 0.93
SMAD4-213ENST00000591914 COMMD5Q9GZQ3 224 aa20.84■□□□□ 0.93
SMAD4-213ENST00000591914 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.83■□□□□ 0.93
SMAD4-213ENST00000591914 H3BMQ9 156 aa20.83■□□□□ 0.93
SMAD4-213ENST00000591914 GABARAPH6UMI1 98 aa20.83■□□□□ 0.93
SMAD4-213ENST00000591914 DHFRP00374 187 aa20.83■□□□□ 0.93
SMAD4-213ENST00000591914 MRPS10P82664 201 aaKnown RBP20.83■□□□□ 0.93
SMAD4-213ENST00000591914 TBC1D26Q86UD7 250 aa20.83■□□□□ 0.93
SMAD4-213ENST00000591914 OR6Q1Q8NGQ2 317 aa20.83■□□□□ 0.93
SMAD4-213ENST00000591914 ISOC1Q96CN7 298 aa20.83■□□□□ 0.93
SMAD4-213ENST00000591914 SORL1Q92673 2214 aa20.83■□□□□ 0.93
SMAD4-213ENST00000591914 IGLC7A0M8Q6 106 aa20.82■□□□□ 0.92
SMAD4-213ENST00000591914 NOL3O60936 208 aaKnown RBP20.82■□□□□ 0.92
SMAD4-213ENST00000591914 KRASP01116 189 aa20.82■□□□□ 0.92
SMAD4-213ENST00000591914 SYNJ2BPP57105 145 aa20.82■□□□□ 0.92
SMAD4-213ENST00000591914 RPEL1Q2QD12 228 aa20.82■□□□□ 0.92
SMAD4-213ENST00000591914 FAM209BQ5JX69 171 aa20.82■□□□□ 0.92
SMAD4-213ENST00000591914 TMEM229BQ8NBD8 167 aa20.82■□□□□ 0.92
SMAD4-213ENST00000591914 OR9G4Q8NGQ1 327 aa20.82■□□□□ 0.92
SMAD4-213ENST00000591914 QTRT1Q9BXR0 403 aaKnown RBP20.82■□□□□ 0.92
SMAD4-213ENST00000591914 FBXL7Q9UJT9 491 aa20.82■□□□□ 0.92
SMAD4-213ENST00000591914 BMPR1BO00238 502 aa20.81■□□□□ 0.92
SMAD4-213ENST00000591914 LY86O95711 162 aa20.81■□□□□ 0.92
SMAD4-213ENST00000591914 CD74P04233 296 aa20.81■□□□□ 0.92
SMAD4-213ENST00000591914 REG1AP05451 166 aa20.81■□□□□ 0.92
SMAD4-213ENST00000591914 SPNP16150 400 aa20.81■□□□□ 0.92
SMAD4-213ENST00000591914 G6PCP35575 357 aa20.81■□□□□ 0.92
SMAD4-213ENST00000591914 SSBP1Q04837 148 aaKnown RBP20.81■□□□□ 0.92
SMAD4-213ENST00000591914 IL34Q6ZMJ4 242 aa20.81■□□□□ 0.92
SMAD4-213ENST00000591914 DNAH9Q9NYC9 4486 aa20.8■□□□□ 0.92
SMAD4-213ENST00000591914 IGLV1-51P01701 117 aa20.8■□□□□ 0.92
SMAD4-213ENST00000591914 HIST1H1BP16401 226 aaKnown RBP20.8■□□□□ 0.92
SMAD4-213ENST00000591914 PTBP1P26599 531 aaKnown RBP eCLIP20.8■□□□□ 0.923e-11■■■■□ 21.8
SMAD4-213ENST00000591914 TAS2R19P59542 299 aa20.8■□□□□ 0.92
SMAD4-213ENST00000591914 THOC7Q6I9Y2 204 aaKnown RBP20.8■□□□□ 0.92
SMAD4-213ENST00000591914 OR4D10Q8NGI6 311 aa20.8■□□□□ 0.92
SMAD4-213ENST00000591914 SMIM4Q8WVI0 70 aa20.8■□□□□ 0.92
SMAD4-213ENST00000591914 ZNF486Q96H40 463 aaPredicted RBP20.8■□□□□ 0.92
SMAD4-213ENST00000591914 SLIRPQ9GZT3 109 aaKnown RBP20.8■□□□□ 0.92
SMAD4-213ENST00000591914 DMRT1Q9Y5R6 373 aa20.8■□□□□ 0.92
SMAD4-213ENST00000591914 IGLV11-55A0A075B6I3 123 aa20.79■□□□□ 0.92
SMAD4-213ENST00000591914 TEX50A0A1B0GTY4 177 aa20.79■□□□□ 0.92
SMAD4-213ENST00000591914 NDUFB8O95169 186 aa20.79■□□□□ 0.92
SMAD4-213ENST00000591914 RND3P61587 244 aa20.79■□□□□ 0.92
SMAD4-213ENST00000591914 CD69Q07108 199 aa20.79■□□□□ 0.92
SMAD4-213ENST00000591914 TATDN3Q17R31 274 aa20.79■□□□□ 0.92
SMAD4-213ENST00000591914 DIRAS2Q96HU8 199 aa20.79■□□□□ 0.92
SMAD4-213ENST00000591914 RABL2AQ9UBK7 228 aaPredicted RBP20.79■□□□□ 0.92
SMAD4-213ENST00000591914 RABL2BQ9UNT1 228 aa20.79■□□□□ 0.92
SMAD4-213ENST00000591914 CTDSPLO15194 276 aa20.78■□□□□ 0.92
SMAD4-213ENST00000591914 DEFA4P12838 97 aa20.78■□□□□ 0.92
SMAD4-213ENST00000591914 OR10W1Q8NGF6 305 aa20.78■□□□□ 0.92
SMAD4-213ENST00000591914 OR1L8Q8NGR8 309 aa20.78■□□□□ 0.92
SMAD4-213ENST00000591914 RAB3DO95716 219 aa20.77■□□□□ 0.92
SMAD4-213ENST00000591914 TRAPPC2P0DI81 140 aa20.77■□□□□ 0.92
SMAD4-213ENST00000591914 TRAPPC2BP0DI82 140 aa20.77■□□□□ 0.92
SMAD4-213ENST00000591914 PGAM2P15259 253 aa20.77■□□□□ 0.92
SMAD4-213ENST00000591914 STEAP1BQ6NZ63 245 aa20.77■□□□□ 0.92
SMAD4-213ENST00000591914 HSD17B13Q7Z5P4 300 aaPredicted RBP20.77■□□□□ 0.92
SMAD4-213ENST00000591914 HAPLN4Q86UW8 402 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms