RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 EFNA2O43921 213 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 IGHV3-7P01780 117 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 TFPI2P48307 235 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 GNG4P50150 75 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 PRCDQ00LT1 54 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 LSAMPQ13449 338 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 FOXE3Q13461 319 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 LCNL1Q6ZST4 164 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 Q8NA96 180 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 DRAXINQ8NBI3 349 aaPredicted RBP5.21□□□□□ -1.58
SMAD4-212ENST00000591126 RCC1LQ96I51 464 aaKnown RBP5.21□□□□□ -1.58
SMAD4-212ENST00000591126 SMIM8Q96KF7 97 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 NEURL2Q9BR09 285 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 MRPL20Q9BYC9 149 aaKnown RBP5.21□□□□□ -1.58
SMAD4-212ENST00000591126 RCC2Q9P258 522 aaKnown RBP5.21□□□□□ -1.58
SMAD4-212ENST00000591126 GAB2Q9UQC2 676 aa5.21□□□□□ -1.58
SMAD4-212ENST00000591126 GATCO43716 136 aaKnown RBP5.2□□□□□ -1.58
SMAD4-212ENST00000591126 CRISP2P16562 243 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 TOR2AQ5JU69 321 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 ZFP82Q8N141 532 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 CIARTQ8N365 385 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-212ENST00000591126 FGFRL1Q8N441 504 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 OR1P1Q8NH06 330 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 SVIPQ8NHG7 77 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 VGLL1Q99990 258 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 NXF2Q9GZY0 626 aaKnown RBP5.2□□□□□ -1.58
SMAD4-212ENST00000591126 CBY1Q9Y3M2 126 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 TIMM8BQ9Y5J9 83 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-212ENST00000591126 CNOT1A5YKK6 2376 aaKnown RBP5.2□□□□□ -1.58
SMAD4-212ENST00000591126 TMEM97Q5BJF2 176 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 FAM78BQ5VT40 261 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 TMEM42Q69YG0 159 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 SLC25A32Q9H2D1 315 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 IFI27L2Q9H2X8 130 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 NCOR1O75376 2440 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 CACNA1HO95180 2353 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 PTPRDP23468 1912 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 SCN3AQ9NY46 2000 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 LINC01549A6NIU2 74 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 LYNX1G3V0Z9 82 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 LINC00869P0C866 280 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 LYNX1P0DP58 116 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 FCER1GP30273 86 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 FCGR2BP31994 310 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-212ENST00000591126 OTX1P32242 354 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-212ENST00000591126 ZNF137PP52743 207 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 SNRPNP63162 240 aaKnown RBP5.2□□□□□ -1.58
SMAD4-212ENST00000591126 WDR73Q6P4I2 378 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 BAP18Q8IXM2 172 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 FAM110DQ8TAY7 271 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-212ENST00000591126 PROK2Q9HC23 129 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 JKAMPQ9P055 326 aa5.2□□□□□ -1.58
SMAD4-212ENST00000591126 TRBV6-7A0A0A0MS04 114 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 C5orf17Q8NAS9 161 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 SLC25A38Q96DW6 304 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 TMEM101Q96IK0 257 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 WNT10AQ9GZT5 417 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 TRAV8-7A0A075B6U6 113 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 CTXND1A0A1B0GTU2 59 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 NXPH3O95157 252 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 CLEC19AQ6UXS0 136 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 ZNF562Q6V9R5 426 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 DPH3Q96FX2 82 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 LINC01587Q99440 93 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 PRADC1Q9BSG0 188 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 TMEM189A5PLL7 270 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 MSGN1A6NI15 193 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 H7BYZ3 331 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 PYCARD-AS1I3L0S3 204 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 MELTFP08582 738 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 CCL3L1P16619 93 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 CEBPDP49716 269 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-212ENST00000591126 NANOS3P60323 173 aaKnown RBP5.19□□□□□ -1.58
SMAD4-212ENST00000591126 OPCMLQ14982 345 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 SPANXN1Q5VSR9 72 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 ZNF429Q86V71 674 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 C1QL4Q86Z23 238 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 BLNKQ8WV28 456 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 DUX3Q96PT4 197 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 TMPRSS13Q9BYE2 586 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 KCNK15Q9H427 330 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 SDF2L1Q9HCN8 221 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 ANKRD12Q6UB98 2062 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 DOCK4Q8N1I0 1966 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 CA2P00918 260 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 P01737 135 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 IGHV4-39P01824 125 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 C8orf88P0DMB2 117 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 HCP5Q6MZN7 132 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 C11orf87Q6NUJ2 197 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 NDUFA11Q86Y39 141 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 SVBPQ8N300 66 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 GBGT1Q8N5D6 347 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 OR5C1Q8NGR4 320 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 MITD1Q8WV92 249 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 PHYHIPLQ96FC7 376 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 CROCCQ5TZA2 2017 aa5.19□□□□□ -1.58
SMAD4-212ENST00000591126 LYPD3O95274 346 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 HLA-DQB1P01920 261 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 HERVK_113P61574 105 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms